RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 GOLGA1Q92805 767 aa23.64■■□□□ 1.37
CCDC9-204ENST00000599398 SFMBT1Q9UHJ3 866 aa23.64■■□□□ 1.37
CCDC9-204ENST00000599398 DNAJC12Q9UKB3 198 aa23.64■■□□□ 1.37
CCDC9-204ENST00000599398 BECN2A8MW95 431 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 FBXO21O94952 628 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 MBD3O95983 291 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 CNR2P34972 360 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 GPD2P43304 727 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 TNFRSF4P43489 277 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 MRPS21P82921 87 aaKnown RBP23.63■■□□□ 1.37
CCDC9-204ENST00000599398 TCP11X2Q5H9J9 407 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 NUDT18Q6ZVK8 323 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 CEP68Q76N32 757 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 PHTF2Q8N3S3 785 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 DCLK2Q8N568 766 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 SHC3Q92529 594 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 PLD4Q96BZ4 506 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 SIX2Q9NPC8 291 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 PLK2Q9NYY3 685 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 MARK1Q9P0L2 795 aa23.63■■□□□ 1.37
CCDC9-204ENST00000599398 AGO1Q9UL18 857 aaKnown RBP23.63■■□□□ 1.37
CCDC9-204ENST00000599398 TRIM24O15164 1050 aa23.62■■□□□ 1.37
CCDC9-204ENST00000599398 KLF8O95600 359 aaPredicted RBP23.62■■□□□ 1.37
CCDC9-204ENST00000599398 LTFP02788 710 aa23.62■■□□□ 1.37
CCDC9-204ENST00000599398 EEF1GP26641 437 aaKnown RBP23.62■■□□□ 1.37
CCDC9-204ENST00000599398 CHKAP35790 457 aa23.62■■□□□ 1.37
CCDC9-204ENST00000599398 EMC10Q5UCC4 262 aa23.62■■□□□ 1.37
CCDC9-204ENST00000599398 ALLCQ8N6M5 410 aa23.62■■□□□ 1.37
CCDC9-204ENST00000599398 TERB1Q8NA31 727 aa23.62■■□□□ 1.37
CCDC9-204ENST00000599398 TSTD1Q8NFU3 115 aa23.62■■□□□ 1.37
CCDC9-204ENST00000599398 ENOX1Q8TC92 643 aaKnown RBP23.62■■□□□ 1.37
CCDC9-204ENST00000599398 AJAP1Q9UKB5 411 aaPredicted RBP23.62■■□□□ 1.37
CCDC9-204ENST00000599398 MMP17Q9ULZ9 603 aa23.62■■□□□ 1.37
CCDC9-204ENST00000599398 HBS1LQ9Y450 684 aaKnown RBP23.62■■□□□ 1.37
CCDC9-204ENST00000599398 ZNF292O60281 2723 aa23.62■■□□□ 1.37
CCDC9-204ENST00000599398 SDK1Q7Z5N4 2213 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 A0A0A0MRY4 1105 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 CACNG3O60359 315 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 APBB3O95704 486 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 ACADSBP45954 432 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 HARS2P49590 506 aaKnown RBP23.61■■□□□ 1.37
CCDC9-204ENST00000599398 C10orf76Q5T2E6 689 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 SCUBE3Q8IX30 993 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 TXNDC5Q8NBS9 432 aaKnown RBP23.61■■□□□ 1.37
CCDC9-204ENST00000599398 ZDHHC4Q9NPG8 344 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 ANO10Q9NW15 660 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 TAB2Q9NYJ8 693 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 GMEB2Q9UKD1 530 aa23.61■■□□□ 1.37
CCDC9-204ENST00000599398 SPAG17Q6Q759 2223 aa23.6■■□□□ 1.37
CCDC9-204ENST00000599398 CCDC163A0A0D9SF12 145 aa23.6■■□□□ 1.37
CCDC9-204ENST00000599398 AXIN1O15169 862 aa23.6■■□□□ 1.37
CCDC9-204ENST00000599398 MSI1O43347 362 aaKnown RBP23.6■■□□□ 1.37
CCDC9-204ENST00000599398 KIR2DL1P43626 348 aaPredicted RBP23.6■■□□□ 1.37
CCDC9-204ENST00000599398 PTK2Q05397 1052 aa23.6■■□□□ 1.37
CCDC9-204ENST00000599398 TRIP4Q15650 581 aaPredicted RBP23.6■■□□□ 1.37
CCDC9-204ENST00000599398 MEA1Q16626 185 aa23.6■■□□□ 1.37
CCDC9-204ENST00000599398 CCDC183Q5T5S1 534 aa23.6■■□□□ 1.37
CCDC9-204ENST00000599398 KIAA2013Q8IYS2 634 aa23.6■■□□□ 1.37
CCDC9-204ENST00000599398 IL17RCQ8NAC3 791 aa23.6■■□□□ 1.37
CCDC9-204ENST00000599398 FAM149B1Q96BN6 582 aa23.6■■□□□ 1.37
CCDC9-204ENST00000599398 SART1O43290 800 aaKnown RBP23.59■■□□□ 1.37
CCDC9-204ENST00000599398 RPP40O75818 363 aaKnown RBP23.59■■□□□ 1.37
CCDC9-204ENST00000599398 CYBBP04839 570 aa23.59■■□□□ 1.37
CCDC9-204ENST00000599398 DGKGP49619 791 aa23.59■■□□□ 1.37
CCDC9-204ENST00000599398 RAPGEF1Q13905 1077 aa23.59■■□□□ 1.37
CCDC9-204ENST00000599398 STX1AQ16623 288 aa23.59■■□□□ 1.37
CCDC9-204ENST00000599398 HSF5Q4G112 596 aaPredicted RBP23.59■■□□□ 1.37
CCDC9-204ENST00000599398 MSANTD2Q6P1R3 559 aa23.59■■□□□ 1.37
CCDC9-204ENST00000599398 C11orf57Q6ZUT1 292 aaPredicted RBP23.59■■□□□ 1.37
CCDC9-204ENST00000599398 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.59■■□□□ 1.37
CCDC9-204ENST00000599398 ZNF513Q8N8E2 541 aaPredicted RBP23.59■■□□□ 1.37
CCDC9-204ENST00000599398 STK32AQ8WU08 396 aa23.59■■□□□ 1.37
CCDC9-204ENST00000599398 LSM14BQ9BX40 385 aaKnown RBP23.59■■□□□ 1.37
CCDC9-204ENST00000599398 CYTH4Q9UIA0 394 aa23.59■■□□□ 1.37
CCDC9-204ENST00000599398 EML5Q05BV3 1969 aa23.59■■□□□ 1.37
CCDC9-204ENST00000599398 FOXN3O00409 490 aaPredicted RBP23.58■■□□□ 1.37
CCDC9-204ENST00000599398 TPM2P07951 284 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 PNMA6AP0CW24 399 aaPredicted RBP23.58■■□□□ 1.37
CCDC9-204ENST00000599398 NCAM1P13591 858 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 RPL34P49207 117 aaKnown RBP23.58■■□□□ 1.37
CCDC9-204ENST00000599398 DGKEP52429 567 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 KCNMA1Q12791 1236 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 CRY1Q16526 586 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 EOGTQ5NDL2 527 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 LAIR1Q6GTX8 287 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 ANO7Q6IWH7 933 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 TOGARAM2Q6ZUX3 1019 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 PASD1Q8IV76 773 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 GAB3Q8WWW8 586 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 SLC4A5Q9BY07 1137 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 VPS16Q9H269 839 aa23.58■■□□□ 1.37
CCDC9-204ENST00000599398 E5RJQ4 531 aa23.57■■□□□ 1.36
CCDC9-204ENST00000599398 SGK1O00141 431 aa23.57■■□□□ 1.36
CCDC9-204ENST00000599398 PDCLQ13371 301 aa23.57■■□□□ 1.36
CCDC9-204ENST00000599398 CDKAL1Q5VV42 579 aa23.57■■□□□ 1.36
CCDC9-204ENST00000599398 FYB2Q5VWT5 728 aa23.57■■□□□ 1.36
CCDC9-204ENST00000599398 CPXM2Q8N436 756 aa23.57■■□□□ 1.36
CCDC9-204ENST00000599398 DDI1Q8WTU0 396 aa23.57■■□□□ 1.36
CCDC9-204ENST00000599398 FANCLQ9NW38 375 aa23.57■■□□□ 1.36
CCDC9-204ENST00000599398 EBF1Q9UH73 591 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms