RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 TULP2O00295 520 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 MAPK13O15264 365 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 GJB3O75712 270 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 RHOBTB3O94955 611 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 CAPNS1P04632 268 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 PLA2G4AP47712 749 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 DGKGP49619 791 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 MFAP3P55082 362 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 ENPP2Q13822 863 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 NFIL3Q16649 462 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 ZNF394Q53GI3 561 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 C10orf120Q5SQS8 335 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 TMEM215Q68D42 235 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 SLC4A11Q8NBS3 891 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 SORCS1Q8WY21 1168 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 TATDN2Q93075 761 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 PIWIL1Q96J94 861 aaKnown RBP11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 HSPA12BQ96MM6 686 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 GTPBP2Q9BX10 602 aaKnown RBP11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 NT5C1AQ9BXI3 368 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 NIF3L1Q9GZT8 377 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 MKRN2Q9H000 416 aaKnown RBP11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 MMRN2Q9H8L6 949 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 CYP3A43Q9HB55 503 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 DNMT3LQ9UJW3 386 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 NAGPAQ9UK23 515 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 CFAP45Q9UL16 551 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 SLCO1B1Q9Y6L6 691 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 STON1Q9Y6Q2 735 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 PLXND1Q9Y4D7 1925 aa11.6□□□□□ -0.55
GRAMD1A-209ENST00000598580 TAF4O00268 1085 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 AP5Z1O43299 807 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 GABBR2O75899 941 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 HMBSP08397 361 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 P4HA1P13674 534 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 NR2F2P24468 414 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 IL12RB1P42701 662 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 RAD23BP54727 409 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 SIM1P81133 766 aaPredicted RBP11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 BNC1Q01954 994 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 BYSLQ13895 437 aaKnown RBP11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 DUOXA1Q1HG43 343 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 FUT11Q495W5 492 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 CCDC186Q7Z3E2 898 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 TRMT11Q7Z4G4 463 aaKnown RBP11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 SMYD4Q8IYR2 804 aaPredicted RBP11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 ZNF276Q8N554 614 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 MINDY1Q8N5J2 469 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 PNPLA8Q9NP80 782 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 THAP10Q9P2Z0 257 aaPredicted RBP11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 AGO1Q9UL18 857 aaKnown RBP11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 FRMD4BQ9Y2L6 1034 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 SLC27A6Q9Y2P4 619 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 PCDHA5Q9Y5H7 936 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 FREM2Q5SZK8 3169 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 BAHCC1Q9P281 2608 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 WDFY3Q8IZQ1 3526 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 NBEAQ8NFP9 2946 aa11.59□□□□□ -0.55
GRAMD1A-209ENST00000598580 ADAMTS9Q9P2N4 1935 aa11.58□□□□□ -0.55
GRAMD1A-209ENST00000598580 SRRM3A6NNA2 597 aaPredicted RBP11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 GFRA2O00451 464 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 ARHGAP33O14559 1287 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 CALUO43852 315 aaPredicted RBP11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 KIF20AO95235 890 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 HOXD12P35452 270 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 GFPT1Q06210 699 aaPredicted RBP11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 EFEMP1Q12805 493 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 ADAM9Q13443 819 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 RAB41Q5JT25 222 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 SLC36A4Q6YBV0 504 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 PIGZQ86VD9 579 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 FAM186BQ8IYM0 893 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 CHCHD4Q8N4Q1 142 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 HEXIM2Q96MH2 286 aaKnown RBP11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 XPO6Q96QU8 1125 aaKnown RBP11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 ITM2CQ9NQX7 267 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 CISHQ9NSE2 258 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 WSB2Q9NYS7 404 aaPredicted RBP11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 CLIC5Q9NZA1 410 aa11.58□□□□□ -0.56
GRAMD1A-209ENST00000598580 APC2O95996 2303 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 SH3BP5O60239 455 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 ZNF217O75362 1048 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 PRKCHP24723 683 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 CORO1AP31146 461 aaKnown RBP11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 PSMC2P35998 433 aaKnown RBP11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 SYKP43405 635 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 COPAP53621 1224 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 CBWD6Q4V339 395 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 CBWD3Q5JTY5 395 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 CBWD5Q5RIA9 395 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 ARHGAP17Q68EM7 881 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 PM20D1Q6GTS8 502 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 KIAA1324Q6UXG2 1013 aaKnown RBP11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 KRBA2Q6ZNG9 492 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 INTS8Q75QN2 995 aaKnown RBP11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 METTL3Q86U44 580 aaKnown RBP11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 DENND1CQ8IV53 801 aa11.57□□□□□ -0.56
GRAMD1A-209ENST00000598580 FAM217AQ8IXS0 508 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms