RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 EDEM2Q9BV94 578 aa18.81■□□□□ 0.6
HOMER3-208ENST00000595756 UBXN6Q9BZV1 441 aa18.81■□□□□ 0.6
HOMER3-208ENST00000595756 ZDHHC4Q9NPG8 344 aa18.81■□□□□ 0.6
HOMER3-208ENST00000595756 BCCIPQ9P287 314 aaKnown RBP eCLIP18.81■□□□□ 0.6
HOMER3-208ENST00000595756 INVSQ9Y283 1065 aa18.81■□□□□ 0.6
HOMER3-208ENST00000595756 TPRP12270 2363 aaKnown RBP18.81■□□□□ 0.6
HOMER3-208ENST00000595756 CHD8Q9HCK8 2581 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 STC2O76061 302 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 BYSLQ13895 437 aaKnown RBP18.8■□□□□ 0.6
HOMER3-208ENST00000595756 RAB41Q5JT25 222 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 TCERG1LQ5VWI1 586 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 RNF43Q68DV7 783 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 ARHGAP18Q8N392 663 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 HMGB4Q8WW32 186 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 SRRTQ9BXP5 876 aaKnown RBP18.8■□□□□ 0.6
HOMER3-208ENST00000595756 NUDT5Q9UKK9 219 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 ZNF510Q9Y2H8 683 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 CEP192Q8TEP8 1941 aa18.8■□□□□ 0.6
HOMER3-208ENST00000595756 LNP1A1A4G5 178 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 TRIM24O15164 1050 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 HOXB2P14652 356 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 NTSR1P30989 418 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 SLC8A3P57103 927 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 CUL2Q13617 745 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 MAP7D1Q3KQU3 841 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 SPDYCQ5MJ68 293 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 TPGS1Q6ZTW0 290 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 LPCAT2Q7L5N7 544 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 PIGZQ86VD9 579 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 FAM114A1Q8IWE2 563 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 ANKRD52Q8NB46 1076 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 NAT10Q9H0A0 1025 aaKnown RBP18.79■□□□□ 0.6
HOMER3-208ENST00000595756 HCN2Q9UL51 889 aa18.79■□□□□ 0.6
HOMER3-208ENST00000595756 KMT2BQ9UMN6 2715 aaPredicted RBP18.78■□□□□ 0.6
HOMER3-208ENST00000595756 DPP6P42658 865 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 DHPSP49366 369 aaPredicted RBP18.78■□□□□ 0.6
HOMER3-208ENST00000595756 DGKGP49619 791 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 BCAT1P54687 386 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 MARSP56192 900 aaKnown RBP18.78■□□□□ 0.6
HOMER3-208ENST00000595756 YWHAEP62258 255 aaKnown RBP18.78■□□□□ 0.6
HOMER3-208ENST00000595756 COG7P83436 770 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 EGFLAMQ63HQ2 1017 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 MIB1Q86YT6 1006 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 RLN3Q8WXF3 142 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 TATDN2Q93075 761 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 SLC35C1Q96A29 364 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 GABRG3Q99928 467 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 LSM14BQ9BX40 385 aaKnown RBP18.78■□□□□ 0.6
HOMER3-208ENST00000595756 DCLK3Q9C098 648 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 EVLQ9UI08 416 aaPredicted RBP18.78■□□□□ 0.6
HOMER3-208ENST00000595756 RASAL2Q9UJF2 1139 aa18.78■□□□□ 0.6
HOMER3-208ENST00000595756 KHNYNO15037 678 aaKnown RBP18.77■□□□□ 0.6
HOMER3-208ENST00000595756 PENKP01210 267 aaPredicted RBP18.77■□□□□ 0.6
HOMER3-208ENST00000595756 PRKCSHP14314 528 aaPredicted RBP18.77■□□□□ 0.6
HOMER3-208ENST00000595756 GABRG2P18507 467 aa18.77■□□□□ 0.6
HOMER3-208ENST00000595756 GOLGA7BQ2TAP0 167 aa18.77■□□□□ 0.6
HOMER3-208ENST00000595756 TOGARAM2Q6ZUX3 1019 aa18.77■□□□□ 0.6
HOMER3-208ENST00000595756 ENOX1Q8TC92 643 aaKnown RBP18.77■□□□□ 0.6
HOMER3-208ENST00000595756 CNTNAP3BQ96NU0 1288 aa18.77■□□□□ 0.6
HOMER3-208ENST00000595756 CNTNAP3Q9BZ76 1288 aa18.77■□□□□ 0.6
HOMER3-208ENST00000595756 THAP9Q9H5L6 903 aa18.77■□□□□ 0.6
HOMER3-208ENST00000595756 CD248Q9HCU0 757 aa18.77■□□□□ 0.6
HOMER3-208ENST00000595756 MBD1Q9UIS9 605 aaPredicted RBP18.77■□□□□ 0.6
HOMER3-208ENST00000595756 FBXO10Q9UK96 956 aa18.77■□□□□ 0.6
HOMER3-208ENST00000595756 TSPAN16Q9UKR8 245 aa18.77■□□□□ 0.6
HOMER3-208ENST00000595756 A0A1W2PQF6 199 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 PRRT4C9JH25 899 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 XPO1O14980 1071 aaKnown RBP18.76■□□□□ 0.59
HOMER3-208ENST00000595756 TBXAS1P24557 533 aaPredicted RBP18.76■□□□□ 0.59
HOMER3-208ENST00000595756 CHKAP35790 457 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 YWHAGP61981 247 aaKnown RBP eCLIP18.76■□□□□ 0.59
HOMER3-208ENST00000595756 TYRO3Q06418 890 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 BST2Q10589 180 aaKnown RBP18.76■□□□□ 0.59
HOMER3-208ENST00000595756 CETN1Q12798 172 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 EFEMP1Q12805 493 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 NFKBIBQ15653 356 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 SGO2Q562F6 1265 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 PEAR1Q5VY43 1037 aaPredicted RBP18.76■□□□□ 0.59
HOMER3-208ENST00000595756 CHPFQ8IZ52 775 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 PGBD3Q8N328 593 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 UBR7Q8N806 425 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 CALCOCO1Q9P1Z2 691 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 STRIP2Q9ULQ0 834 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 SLC27A6Q9Y2P4 619 aa18.76■□□□□ 0.59
HOMER3-208ENST00000595756 GFRA2O00451 464 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 MAP3K13O43283 966 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 ZBED1O96006 694 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 KLKB1P03952 638 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 CISD3P0C7P0 127 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 KCNA4P22459 653 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 CORO1AP31146 461 aaKnown RBP18.75■□□□□ 0.59
HOMER3-208ENST00000595756 HOXD12P35452 270 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 TKTL1P51854 596 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 FYB2Q5VWT5 728 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 LYSMD4Q5XG99 296 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 PM20D1Q6GTS8 502 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 SDE2Q6IQ49 451 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 RSRC2Q7L4I2 434 aaKnown RBP18.75■□□□□ 0.59
HOMER3-208ENST00000595756 BHLHA9Q7RTU4 235 aa18.75■□□□□ 0.59
HOMER3-208ENST00000595756 PIGKQ92643 395 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms