RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 APRTP07741 180 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 TFE3P19532 575 aaPredicted RBP12.68□□□□□ -0.38
LIG1-207ENST00000594759 GSTM4Q03013 218 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 TLR1Q15399 786 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 KYAT3Q6YP21 454 aaKnown RBP12.68□□□□□ -0.38
LIG1-207ENST00000594759 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 STARD8Q92502 1023 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 CITED4Q96RK1 184 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 EPB41L1Q9H4G0 881 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 COG5Q9UP83 839 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 MED24O75448 989 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 HSPA1AP0DMV8 641 aaKnown RBP12.67□□□□□ -0.38
LIG1-207ENST00000594759 HSPA1BP0DMV9 641 aaKnown RBP12.67□□□□□ -0.38
LIG1-207ENST00000594759 COX4I1P13073 169 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 OSBPP22059 807 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 NME3Q13232 169 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 ACSF2Q96CM8 615 aaPredicted RBP12.67□□□□□ -0.38
LIG1-207ENST00000594759 NACC1Q96RE7 527 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 ACP6Q9NPH0 428 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 STK39Q9UEW8 545 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 BANF1O75531 89 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 CETPP11597 493 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 PSMA2P25787 234 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 CASP2P42575 452 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 PHKA2P46019 1235 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 MAPRE2Q15555 327 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 FAM102BQ5T8I3 360 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 GET4Q7L5D6 327 aaPredicted RBP12.67□□□□□ -0.38
LIG1-207ENST00000594759 MICU2Q8IYU8 434 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 VTA1Q9NP79 307 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 VPS51Q9UID3 782 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 E2F8A0AVK6 867 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 ALOX15BO15296 676 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 GABBR2O75899 941 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 P4HA1P13674 534 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 CDH2P19022 906 aaPredicted RBP12.67□□□□□ -0.38
LIG1-207ENST00000594759 KCNA1Q09470 495 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 TAF5Q15542 800 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 ADGRG6Q86SQ4 1221 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 TDRPQ86YL5 185 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 CLEC4FQ8N1N0 589 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 HSPH1Q92598 858 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 MOV10Q9HCE1 1003 aaKnown RBP12.67□□□□□ -0.38
LIG1-207ENST00000594759 GPRC5DQ9NZD1 345 aa12.67□□□□□ -0.38
LIG1-207ENST00000594759 LTN1O94822 1766 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 PDZK1P1A8MUH7 402 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 ETS1P14921 441 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 GRK2P25098 689 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 ELK3P41970 407 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 SLC18A1P54219 525 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 CYP2R1Q6VVX0 501 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 C12orf43Q96C57 262 aaKnown RBP12.66□□□□□ -0.38
LIG1-207ENST00000594759 GTSE1Q9NYZ3 720 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 PCSK1NQ9UHG2 260 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 ADAMTS6Q9UKP5 1117 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 F5H6K3 240 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 CST8O60676 142 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 CLK1P49759 484 aaKnown RBP12.66□□□□□ -0.38
LIG1-207ENST00000594759 CDH15P55291 814 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 KRR1Q13601 381 aaKnown RBP12.66□□□□□ -0.38
LIG1-207ENST00000594759 FASTKD3Q14CZ7 662 aaKnown RBP12.66□□□□□ -0.38
LIG1-207ENST00000594759 GRIK5Q16478 980 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 PGS1Q32NB8 556 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 MARVELD2Q8N4S9 558 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 PSTPIP1O43586 416 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 TFAP2AP05549 437 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
LIG1-207ENST00000594759 ST13P50502 369 aaKnown RBP12.66□□□□□ -0.38
LIG1-207ENST00000594759 NFIAQ12857 509 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 POLNQ7Z5Q5 900 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 DEFB132Q7Z7B7 95 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 SLC47A2Q86VL8 602 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 IFNEQ86WN2 208 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 FAM71DQ8N9W8 422 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 POC5Q8NA72 575 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 IFT43Q96FT9 208 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 CRAMP1Q96RY5 1269 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 ACSS3Q9H6R3 686 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 TCF7L2Q9NQB0 619 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 ABCB10Q9NRK6 738 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 PARVAQ9NVD7 372 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 ITGA11Q9UKX5 1188 aa12.66□□□□□ -0.38
LIG1-207ENST00000594759 CENPXA8MT69 81 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 CLDN25C9JDP6 229 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 P4HBP07237 508 aaKnown RBP12.65□□□□□ -0.38
LIG1-207ENST00000594759 RBP3P10745 1247 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 RALBP11234 206 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 PSMC6P62333 389 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 ROR1Q01973 937 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 KIF19Q2TAC6 998 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 CBWD6Q4V339 395 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 CBWD3Q5JTY5 395 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 CBWD5Q5RIA9 395 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 DUS1LQ6P1R4 473 aaKnown RBP12.65□□□□□ -0.38
LIG1-207ENST00000594759 PTAR1Q7Z6K3 402 aaPredicted RBP12.65□□□□□ -0.38
LIG1-207ENST00000594759 ADGRF4Q8IZF3 695 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 EXD1Q8NHP7 514 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 LRRC15Q8TF66 581 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 PCDH9Q9HC56 1237 aa12.65□□□□□ -0.38
LIG1-207ENST00000594759 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms