RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CACNA2D1P54289 1103 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 PDK2Q15119 407 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 CHI3L2Q15782 390 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 LCLAT1Q6UWP7 414 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 UNC5AQ6ZN44 842 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 RFX8Q6ZV50 586 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 MPP5Q8N3R9 675 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 E2F7Q96AV8 911 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 ACAP3Q96P50 834 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 PPP1R12CQ9BZL4 782 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 PDZD7Q9H5P4 517 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 PCMTD2Q9NV79 361 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 ZNF180Q9UJW8 692 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 MAGEA13PA6NCF6 341 aa17.08■□□□□ 0.33
LIG1-206ENST00000594067 METTL18O95568 372 aa17.08■□□□□ 0.33
LIG1-206ENST00000594067 APOEP02649 317 aa17.08■□□□□ 0.33
LIG1-206ENST00000594067 TMEM132DQ14C87 1099 aa17.08■□□□□ 0.33
LIG1-206ENST00000594067 BOLA3Q53S33 107 aa17.08■□□□□ 0.33
LIG1-206ENST00000594067 PMF1Q6P1K2 205 aa17.08■□□□□ 0.33
LIG1-206ENST00000594067 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.33
LIG1-206ENST00000594067 ZNF184Q99676 751 aaPredicted RBP17.08■□□□□ 0.33
LIG1-206ENST00000594067 SMARCAD1Q9H4L7 1026 aa17.08■□□□□ 0.33
LIG1-206ENST00000594067 VRTNQ9H8Y1 702 aa17.08■□□□□ 0.33
LIG1-206ENST00000594067 BCLAF3A2AJT9 711 aaKnown RBP17.08■□□□□ 0.32
LIG1-206ENST00000594067 KLHL33A6NCF5 533 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 MAP3K7O43318 606 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 HBP1O60381 514 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 ZBTB7AO95365 584 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 TOP3BO95985 862 aaKnown RBP17.08■□□□□ 0.32
LIG1-206ENST00000594067 ENO1P06733 434 aaKnown RBP17.08■□□□□ 0.32
LIG1-206ENST00000594067 MCF2P10911 925 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 ZRSR2Q15696 482 aaKnown RBP17.08■□□□□ 0.32
LIG1-206ENST00000594067 LGSNQ5TDP6 509 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 MROH9Q5TGP6 573 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 TREML1Q86YW5 311 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 NUDCD3Q8IVD9 361 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 SCUBE3Q8IX30 993 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 FBXO27Q8NI29 283 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 MAGEB5Q9BZ81 275 aa17.08■□□□□ 0.32
LIG1-206ENST00000594067 PPARGC1AQ9UBK2 798 aaKnown RBP17.08■□□□□ 0.32
LIG1-206ENST00000594067 CAPN14A8MX76 684 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 B2RBV5 119 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 TRDMT1O14717 391 aaKnown RBP17.07■□□□□ 0.32
LIG1-206ENST00000594067 MAGEC1O60732 1142 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 C22orf31O95567 290 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 TFE3P19532 575 aaPredicted RBP17.07■□□□□ 0.32
LIG1-206ENST00000594067 SDC4P31431 198 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 GRIA1P42261 906 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 PHKA2P46019 1235 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 TNFAIP2Q03169 654 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 AMHR2Q16671 573 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 PPP1R26Q5T8A7 1209 aaPredicted RBP17.07■□□□□ 0.32
LIG1-206ENST00000594067 SLC9A4Q6AI14 798 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 SMYD5Q6GMV2 418 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 MTHFD1LQ6UB35 978 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 OLFML1Q6UWY5 402 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 TRAPPC9Q96Q05 1148 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 FRMD8Q9BZ67 464 aaPredicted RBP17.07■□□□□ 0.32
LIG1-206ENST00000594067 ASB7Q9H672 318 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 PDGFCQ9NRA1 345 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 F5H423 210 aaPredicted RBP17.07■□□□□ 0.32
LIG1-206ENST00000594067 IRX4P78413 519 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 INCA1Q0VD86 236 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 ATG16L1Q676U5 607 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 TMPRSS6Q8IU80 811 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 NDUFAF2Q8N183 169 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 FAM161BQ96MY7 647 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 B3GNT5Q9BYG0 378 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 MIS12Q9H081 205 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 FAM49BQ9NUQ9 324 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 DPP3Q9NY33 737 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 KCNK4Q9NYG8 393 aa17.07■□□□□ 0.32
LIG1-206ENST00000594067 H3BRJ5 948 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 KRT38O76015 456 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 VTNP04004 478 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 TXNP10599 105 aaKnown RBP17.06■□□□□ 0.32
LIG1-206ENST00000594067 ARF4P18085 180 aaPredicted RBP17.06■□□□□ 0.32
LIG1-206ENST00000594067 CCNFP41002 786 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 ATXN1P54253 815 aaKnown RBP17.06■□□□□ 0.32
LIG1-206ENST00000594067 GBE1Q04446 702 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 ZCCHC23Q6ZST2 131 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 ZNF534Q76KX8 674 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 CCNJLQ8IV13 435 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 ARHGAP24Q8N264 748 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 KHSRPQ92945 711 aaKnown RBP eCLIP17.06■□□□□ 0.32
LIG1-206ENST00000594067 SIGLEC10Q96LC7 697 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 C7orf26Q96N11 449 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 C20orf27Q9GZN8 174 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 DDX43Q9NXZ2 648 aaKnown RBP17.06■□□□□ 0.32
LIG1-206ENST00000594067 ETAA1Q9NY74 926 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 CPSF2Q9P2I0 782 aaKnown RBP17.06■□□□□ 0.32
LIG1-206ENST00000594067 AKT3Q9Y243 479 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 NR2E3Q9Y5X4 410 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 HMX2A2RU54 273 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 F8W8V4 182 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 CNMDO75829 334 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms