RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 OVOS1Q6IE37 1185 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 ARMCX5Q6P1M9 558 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 C16orf46Q6P387 395 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 NCEH1Q6PIU2 408 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 ZNF438Q7Z4V0 828 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 LRRTM3Q86VH5 581 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 RAB11FIP4Q86YS3 637 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 OXR1Q8N573 874 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 IL22RA1Q8N6P7 574 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 ZNF366Q8N895 744 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 Q8NA96 180 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 CRYGNQ8WXF5 182 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 BHMTQ93088 406 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 NKD1Q969G9 470 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 PMEPA1Q969W9 287 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 SKA1Q96BD8 255 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 GRAMD1AQ96CP6 724 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 SERAC1Q96JX3 654 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 PPP1R13BQ96KQ4 1090 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 MTRQ99707 1265 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 SRRTQ9BXP5 876 aaKnown RBP3.28□□□□□ -1.88
VRK3-204ENST00000593912 RNF38Q9H0F5 515 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 SEMA3GQ9NS98 782 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 GJB4Q9NTQ9 266 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 TMLHEQ9NVH6 421 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 COPG2Q9UBF2 871 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 CA5BQ9Y2D0 317 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 LOXL2Q9Y4K0 774 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 ZANQ9Y493 2812 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 TCHHQ07283 1943 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 PTPRJQ12913 1337 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 A0A1W2PQ27 194 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 A0A1W2PQ64 194 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 A0A1W2PQC6 194 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 ANKUB1A6NFN9 424 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 LRRIQ4A6NIV6 560 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 NEDD8-MDP1E9PL57 170 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 MKRN2OSH3BPM6 223 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 K7ESM1 405 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 SLC9A3R1O14745 358 aaPredicted RBP3.27□□□□□ -1.89
VRK3-204ENST00000593912 SNPHO15079 494 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 MUSKO15146 869 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 EDIL3O43854 480 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 PPP6R2O75170 966 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 PRPF40AO75400 957 aaKnown RBP3.27□□□□□ -1.89
VRK3-204ENST00000593912 TCEA3O75764 348 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 DNAJB5O75953 348 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 EPHX1P07099 455 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 CSH1P0DML2 217 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 CSH2P0DML3 217 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 SSTR2P30874 369 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 SFNP31947 248 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 NOP2P46087 812 aaKnown RBP3.27□□□□□ -1.89
VRK3-204ENST00000593912 CLK2P49760 499 aaKnown RBP3.27□□□□□ -1.89
VRK3-204ENST00000593912 IST1P53990 364 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 GALCP54803 685 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 NAPAP54920 295 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 SETQ01105 290 aaPredicted RBP3.27□□□□□ -1.89
VRK3-204ENST00000593912 TLE4Q04727 773 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 SPAG1Q07617 926 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 TFDP1Q14186 410 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 FGL2Q14314 439 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 ZNF234Q14588 700 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 SAFBQ15424 915 aaKnown RBP eCLIP3.27□□□□□ -1.89
VRK3-204ENST00000593912 CCDC142Q17RM4 750 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 POM121L1PQ3SYA9 428 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 ZNF542PQ5EBM4 170 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 CLEC9AQ6UXN8 241 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 ALKAL1Q6UXT8 129 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 DSTYKQ6XUX3 929 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 NUDT18Q6ZVK8 323 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 DSG4Q86SJ6 1040 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 BIVMQ86UB2 503 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 BBS7Q8IWZ6 715 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 ULK2Q8IYT8 1036 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 UNC5BQ8IZJ1 945 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 NXPE1Q8N323 547 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 TCP11Q8WWU5 503 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 SORCS1Q8WY21 1168 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 ADPGKQ9BRR6 497 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 TEKT3Q9BXF9 490 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 ZCWPW1Q9H0M4 648 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 ERVMER34-1Q9H9K5 563 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 CYP4F12Q9HCS2 524 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 RIC8AQ9NPQ8 531 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 SPHK2Q9NRA0 654 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 ASF1BQ9NVP2 202 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 THAP10Q9P2Z0 257 aaPredicted RBP3.27□□□□□ -1.89
VRK3-204ENST00000593912 HSFX1Q9UBD0 423 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 LRWD1Q9UFC0 647 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 SERGEFQ9UGK8 458 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 CROTQ9UKG9 612 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 TLK1Q9UKI8 766 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 MRPS18BQ9Y676 258 aaKnown RBP3.27□□□□□ -1.89
VRK3-204ENST00000593912 KCNMB2Q9Y691 235 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 POLEQ07864 2286 aa3.27□□□□□ -1.89
VRK3-204ENST00000593912 MYO7BQ6PIF6 2116 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 LOC101059948A0A1B0GTJ6 334 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 STMND1H3BQB6 276 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 C19orf84I3L1E1 186 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms