RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 BTBD3Q9Y2F9 522 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 PCDHGB2Q9Y5G2 931 aa18.29■□□□□ 0.52
RETREG3-210ENST00000590541 ATP8B3O60423 1300 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 FAM149AA5PLN7 773 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 GOLGA8CPA6NN73 597 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 TPMTP51580 245 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 CDH8P55286 799 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 MYL6P60660 151 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 ENPP2Q13822 863 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 PKP1Q13835 747 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 SNRNP35Q16560 246 aaKnown RBP18.28■□□□□ 0.52
RETREG3-210ENST00000590541 FAM26FQ5R3K3 315 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 CEP57L1Q8IYX8 460 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 GALNT15Q8N3T1 639 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 ZNF507Q8TCN5 953 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 ZNF516Q92618 1163 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 BHMTQ93088 406 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 HPS3Q969F9 1004 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 MED10Q9BTT4 135 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 GZF1Q9H116 711 aaPredicted RBP18.28■□□□□ 0.52
RETREG3-210ENST00000590541 OSER1Q9NX31 292 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 PLK2Q9NYY3 685 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 CGNQ9P2M7 1197 aaKnown RBP18.28■□□□□ 0.52
RETREG3-210ENST00000590541 USP25Q9UHP3 1055 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 EIF2B4Q9UI10 523 aaKnown RBP18.28■□□□□ 0.52
RETREG3-210ENST00000590541 SLCO1B1Q9Y6L6 691 aa18.28■□□□□ 0.52
RETREG3-210ENST00000590541 HELZ2Q9BYK8 2649 aaKnown RBP18.27■□□□□ 0.52
RETREG3-210ENST00000590541 A0A1B0GVT2 93 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 BEST1O76090 585 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 SLFN14P0C7P3 912 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 ACO1P21399 889 aaKnown RBP18.27■□□□□ 0.52
RETREG3-210ENST00000590541 IL12RB1P42701 662 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 KRT85P78386 507 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 STARD3Q14849 445 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 PSMD6Q15008 389 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 EPM2AIP1Q7L775 607 aaPredicted RBP18.27■□□□□ 0.52
RETREG3-210ENST00000590541 FUKQ8N0W3 1084 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 CCDC127Q96BQ5 260 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 SMARCD1Q96GM5 515 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 SMOQ99835 787 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 SMYD3Q9H7B4 428 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.27■□□□□ 0.52
RETREG3-210ENST00000590541 KRT82Q9NSB4 513 aa18.27■□□□□ 0.52
RETREG3-210ENST00000590541 THAP10Q9P2Z0 257 aaPredicted RBP18.27■□□□□ 0.52
RETREG3-210ENST00000590541 LSM7Q9UK45 103 aaKnown RBP18.27■□□□□ 0.52
RETREG3-210ENST00000590541 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.27■□□□□ 0.52
RETREG3-210ENST00000590541 AP1G2O75843 785 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 C1QL1O75973 258 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 IGLV3-19P01714 112 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 MYL1P05976 194 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 CMA1P23946 247 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 OXTRP30559 389 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 ATP5C1P36542 298 aaKnown RBP18.26■□□□□ 0.51
RETREG3-210ENST00000590541 ZNF132P52740 706 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 EHHADHQ08426 723 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 C19orf57Q0VDD7 668 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 SMAD1Q15797 465 aaKnown RBP18.26■□□□□ 0.51
RETREG3-210ENST00000590541 PTPRNQ16849 979 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 Q6ZNB5 142 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 TMPRSS6Q8IU80 811 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 PDCD7Q8N8D1 485 aaKnown RBP18.26■□□□□ 0.51
RETREG3-210ENST00000590541 SIPA1Q96FS4 1042 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 UBL7Q96S82 380 aaPredicted RBP18.26■□□□□ 0.51
RETREG3-210ENST00000590541 CYLDQ9NQC7 956 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 TLR8Q9NR97 1041 aaKnown RBP18.26■□□□□ 0.51
RETREG3-210ENST00000590541 SLC27A6Q9Y2P4 619 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 ASH1LQ9NR48 2969 aaKnown RBP18.26■□□□□ 0.51
RETREG3-210ENST00000590541 ASXL3Q9C0F0 2248 aa18.26■□□□□ 0.51
RETREG3-210ENST00000590541 TGFB1I1O43294 461 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 ATICP31939 592 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 CSNK1EP49674 416 aaKnown RBP18.25■□□□□ 0.51
RETREG3-210ENST00000590541 COPAP53621 1224 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 CYP24A1Q07973 514 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 TRPC3Q13507 836 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 GEN1Q17RS7 908 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 SPATA32Q96LK8 384 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 NUP58Q9BVL2 599 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 SCAND2PQ9GZW5 306 aaPredicted RBP18.25■□□□□ 0.51
RETREG3-210ENST00000590541 SDCBP2Q9H190 292 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 FBXO44Q9H4M3 255 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 CSNK1G1Q9HCP0 422 aa18.25■□□□□ 0.51
RETREG3-210ENST00000590541 FLNBO75369 2602 aaKnown RBP18.25■□□□□ 0.51
RETREG3-210ENST00000590541 MDM4O15151 490 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 TNFSF14O43557 240 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 CCDC130P13994 396 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 ABCG1P45844 678 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 MFAP3P55082 362 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 GOLGA8FQ08AF8 430 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 GOLGA8DPQ0D2H9 430 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 SUZ12Q15022 739 aaKnown RBP18.24■□□□□ 0.51
RETREG3-210ENST00000590541 KIF19Q2TAC6 998 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 ACOT1Q86TX2 421 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 PRCCQ92733 491 aaPredicted RBP18.24■□□□□ 0.51
RETREG3-210ENST00000590541 SYAP1Q96A49 352 aaPredicted RBP18.24■□□□□ 0.51
RETREG3-210ENST00000590541 ELMO3Q96BJ8 720 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 TNIP3Q96KP6 325 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 DCBLD2Q96PD2 775 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 VRTNQ9H8Y1 702 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 NMUR1Q9HB89 426 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 AGPAT3Q9NRZ7 376 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms