RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 CDK5RAP1Q96SZ6 601 aaKnown RBP22.23■■□□□ 1.15
R3HDM4-204ENST00000589428 RPP25Q9BUL9 199 aaKnown RBP22.23■■□□□ 1.15
R3HDM4-204ENST00000589428 CCSER2Q9H7U1 834 aa22.23■■□□□ 1.15
R3HDM4-204ENST00000589428 PARVAQ9NVD7 372 aa22.23■■□□□ 1.15
R3HDM4-204ENST00000589428 CLIC5Q9NZA1 410 aa22.23■■□□□ 1.15
R3HDM4-204ENST00000589428 WDR35Q9P2L0 1181 aa22.23■■□□□ 1.15
R3HDM4-204ENST00000589428 SCINQ9Y6U3 715 aa22.23■■□□□ 1.15
R3HDM4-204ENST00000589428 SART1O43290 800 aaKnown RBP22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 COCHO43405 550 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 DCXO43602 365 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 MBL2P11226 248 aaPredicted RBP22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 RARGP13631 454 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 PGFP49763 221 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 HADHBP55084 474 aaKnown RBP22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 NAP1L1P55209 391 aaKnown RBP22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 YWHAGP61981 247 aaKnown RBP eCLIP22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 VITQ6UXI7 678 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 SCD5Q86SK9 330 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 YAF2Q8IY57 180 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 CLEC4CQ8WTT0 213 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 IRGQQ8WZA9 623 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 GOLGA1Q92805 767 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 TRIM7Q9C029 511 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 ARHGAP26Q9UNA1 814 aa22.22■■□□□ 1.15
R3HDM4-204ENST00000589428 BDP1A6H8Y1 2624 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 PSMC3P17980 439 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 SLC7A9P82251 487 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 OR6B2Q6IFH4 312 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 UBALD2Q8IYN6 164 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 TPCN2Q8NHX9 752 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 PLA2G2FQ9BZM2 168 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 MRPL47Q9HD33 250 aaKnown RBP22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 OSER1Q9NX31 292 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 DUSP12Q9UNI6 340 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 CCL26Q9Y258 94 aa22.21■■□□□ 1.15
R3HDM4-204ENST00000589428 GRID2IPA4D2P6 1211 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 GRM2Q14416 872 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 C10orf120Q5SQS8 335 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 FAM102AQ5T9C2 384 aaPredicted RBP22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 BTBD8Q5XKL5 378 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 RSRC2Q7L4I2 434 aaKnown RBP22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 MFSD6LQ8IWD5 586 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 TTC16Q8NEE8 873 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 BPIFB1Q8TDL5 484 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 NDRG1Q92597 394 aaKnown RBP22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 RSPRY1Q96DX4 576 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 MCEEQ96PE7 176 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 TRMT61BQ9BVS5 477 aaKnown RBP22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 RNF38Q9H0F5 515 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 CPQQ9Y646 472 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 MYO10Q9HD67 2058 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 YJEFN3A6XGL0 299 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 E7ENQ6 273 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 SRFP11831 508 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 ALADP13716 330 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 ATP5C1P36542 298 aaKnown RBP22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 GNG11P61952 73 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 RPL7AP62424 266 aaKnown RBP22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 ZNF569Q5MCW4 686 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 BHLHA9Q7RTU4 235 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 ZDHHC17Q8IUH5 632 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 LRRC57Q8N9N7 239 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 WDR24Q96S15 920 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 METTL5Q9NRN9 209 aaKnown RBP22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 SMPD4Q9NXE4 827 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 ANAPC7Q9UJX3 599 aa22.2■■□□□ 1.14
R3HDM4-204ENST00000589428 HELZP42694 1942 aaKnown RBP22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 SIGLEC16A6NMB1 481 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 FANCGO15287 622 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 BUB1BO60566 1050 aaPredicted RBP22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 ETF1P62495 437 aaKnown RBP22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 SLC6A3Q01959 620 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 IFI16Q16666 785 aaKnown RBP22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 KLHDC10Q6PID8 442 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 DDX42Q86XP3 938 aaKnown RBP eCLIP22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 ZNF276Q8N554 614 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 SH3RF2Q8TEC5 729 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 FAM149B1Q96BN6 582 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 BTBD6Q96KE9 485 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 SELENOOQ9BVL4 669 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 GOLPH3Q9H4A6 298 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 ABCC13Q9NSE7 274 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 THG1LQ9NWX6 298 aaKnown RBP22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 MUC3AQ02505 3323 aa22.19■■□□□ 1.14
R3HDM4-204ENST00000589428 TMEM191CA6NGB0 347 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 NARSO43776 548 aaKnown RBP22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 PALMO75781 387 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 KRT3P12035 628 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 FCHO2Q0JRZ9 810 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 USP4Q13107 963 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 TAF5Q15542 800 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 BSPRYQ5W0U4 402 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 SLC35F6Q8N357 371 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 TRIM58Q8NG06 486 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 JOSD2Q8TAC2 188 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 RNF139Q8WU17 664 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 ALS2CR12Q96Q35 445 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 TRIM62Q9BVG3 475 aa22.18■■□□□ 1.14
R3HDM4-204ENST00000589428 SMOC2Q9H3U7 446 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms