RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 NAP1L2Q9ULW6 460 aaPredicted RBP8.55□□□□□ -1.04
ATG4D-210ENST00000588972 GTF2A1LQ9UNN4 478 aa8.55□□□□□ -1.04
ATG4D-210ENST00000588972 PCDHGB2Q9Y5G2 931 aa8.55□□□□□ -1.04
ATG4D-210ENST00000588972 DDX49Q9Y6V7 483 aaKnown RBP8.55□□□□□ -1.04
ATG4D-210ENST00000588972 A0A0G2JNJ9 132 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 hCG_1642624A0A1W2PR95 340 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 EPOPA6NHQ4 379 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 ZBTB43O43298 467 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 FURINP09958 794 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 SUPT20HL2P0C7V6 817 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 MALP21145 153 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 VIPR1P32241 457 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 RFC2P35250 354 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 GRK6P43250 576 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 ITGA1P56199 1179 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 PSMC6P62333 389 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 BIRC3Q13489 604 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 TOB2Q14106 344 aaPredicted RBP8.54□□□□□ -1.04
ATG4D-210ENST00000588972 ALFQ53S48 1182 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 HIBCHQ6NVY1 386 aaPredicted RBP8.54□□□□□ -1.04
ATG4D-210ENST00000588972 FBXO16Q8IX29 292 aaPredicted RBP8.54□□□□□ -1.04
ATG4D-210ENST00000588972 TMTC2Q8N394 836 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 CELF5Q8N6W0 485 aaKnown RBP8.54□□□□□ -1.04
ATG4D-210ENST00000588972 RNF152Q8N8N0 203 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 CCHCR1Q8TD31 782 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 ARNTL2Q8WYA1 636 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 A1CFQ9NQ94 594 aaKnown RBP8.54□□□□□ -1.04
ATG4D-210ENST00000588972 Q9UFV3 132 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 FEZ2Q9UHY8 353 aaPredicted RBP8.54□□□□□ -1.04
ATG4D-210ENST00000588972 Q9Y3F1 56 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 CYP46A1Q9Y6A2 500 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 SCN5AQ14524 2016 aa8.54□□□□□ -1.04
ATG4D-210ENST00000588972 SCN10AQ9Y5Y9 1956 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 HMGB1P1B2RPK0 211 aaPredicted RBP8.53□□□□□ -1.04
ATG4D-210ENST00000588972 F8W8V4 182 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 HRKO00198 91 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 RFXAPO00287 272 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 DDX3XO00571 662 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATG4D-210ENST00000588972 ZBTB5O15062 677 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 FGF18O76093 207 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 IL18RAPO95256 599 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 AMY1AP04745 511 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 CALM1P0DP23 149 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 CALM2P0DP24 149 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 CALM3P0DP25 149 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 BRAFP15056 766 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 KIF5BP33176 963 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 TAP1Q03518 808 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 PMS2P11Q13670 270 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 DAG1Q14118 895 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 ELF2Q15723 593 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 KRT40Q6A162 431 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 TLDC1Q6P9B6 456 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 SLC30A10Q6XR72 485 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 SYNE3Q6ZMZ3 975 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 TMTC3Q6ZXV5 915 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 TAS1R1Q7RTX1 841 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 DEFB128Q7Z7B8 93 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 STK32CQ86UX6 486 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 IRF2BP1Q8IU81 584 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 PQLC1Q8N2U9 271 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 SRBD1Q8N5C6 995 aaKnown RBP8.53□□□□□ -1.04
ATG4D-210ENST00000588972 FANCBQ8NB91 859 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 SMARCC2Q8TAQ2 1214 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 PHOSPHO2Q8TCD6 241 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 CCT6BQ92526 530 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 ARL8AQ96BM9 186 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 CYFIP2Q96F07 1278 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 MRGPRX1Q96LB2 322 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 AGXT2Q9BYV1 514 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 TM6SF1Q9BZW5 370 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 RIOX1Q9H6W3 641 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 BCO1Q9HAY6 547 aa8.53□□□□□ -1.04
ATG4D-210ENST00000588972 KIF28PB7ZC32 967 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 TLR5O60602 858 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 BAIAP3O94812 1187 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 WNT11O96014 354 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 CYP2C9P11712 490 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 CALML3P27482 149 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 SREBF1P36956 1147 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 CPT1AP50416 773 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 METAP2P50579 478 aaKnown RBP eCLIP8.52□□□□□ -1.05
ATG4D-210ENST00000588972 MAPK10P53779 464 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 PER3P56645 1201 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 BAATQ14032 418 aaPredicted RBP8.52□□□□□ -1.05
ATG4D-210ENST00000588972 TAPT1Q6NXT6 567 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 HERC6Q8IVU3 1022 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 CCDC33Q8N5R6 958 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 OR7D4Q8NG98 312 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 ZNF480Q8WV37 535 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 TBC1D5Q92609 795 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 MSLNLQ96KJ4 702 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 CLIC6Q96NY7 704 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 COLEC11Q9BWP8 271 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 SPZ1Q9BXG8 430 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 WDCPQ9H6R7 721 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 AGO4Q9HCK5 861 aaKnown RBP8.52□□□□□ -1.05
ATG4D-210ENST00000588972 PDGFCQ9NRA1 345 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 PDRG1Q9NUG6 133 aa8.52□□□□□ -1.05
ATG4D-210ENST00000588972 CYP39A1Q9NYL5 469 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms