RNA–Protein interactions for RNA: ENST00000588671.2

PCSK4-208, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-208ENST00000588671 PDCL3Q9H2J4 239 aa17.24■□□□□ 0.35
PCSK4-208ENST00000588671 DNAJC17Q9NVM6 304 aaKnown RBP17.24■□□□□ 0.35
PCSK4-208ENST00000588671 EBF1Q9UH73 591 aa17.24■□□□□ 0.35
PCSK4-208ENST00000588671 MMP17Q9ULZ9 603 aa17.24■□□□□ 0.35
PCSK4-208ENST00000588671 NFE2L3Q9Y4A8 694 aa17.24■□□□□ 0.35
PCSK4-208ENST00000588671 DAAM1Q9Y4D1 1078 aa17.24■□□□□ 0.35
PCSK4-208ENST00000588671 PTPRZ1P23471 2315 aaPredicted RBP17.24■□□□□ 0.35
PCSK4-208ENST00000588671 TULP2O00295 520 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 CAPN9O14815 690 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 NPC1O15118 1278 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 LTFP02788 710 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 SLC11A2P49281 568 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 DGKGP49619 791 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 STX1AQ16623 288 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 CCDC183Q5T5S1 534 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 NUGGCQ68CJ6 796 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 CACNA2D4Q7Z3S7 1137 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.23■□□□□ 0.35
PCSK4-208ENST00000588671 DENND1CQ8IV53 801 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 ETFBKMTQ8IXQ9 262 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 CPXM2Q8N436 756 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 ZNF557Q8N988 423 aaPredicted RBP17.23■□□□□ 0.35
PCSK4-208ENST00000588671 GAB3Q8WWW8 586 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 FAM149B1Q96BN6 582 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 SLC2A11Q9BYW1 496 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 TMEM51Q9NW97 253 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 DNAJC12Q9UKB3 198 aa17.23■□□□□ 0.35
PCSK4-208ENST00000588671 YJEFN3A6XGL0 299 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 E7ENQ6 273 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 TIMM44O43615 452 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 GREM1O60565 184 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 LRP3O75074 770 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 RPP40O75818 363 aaKnown RBP17.22■□□□□ 0.35
PCSK4-208ENST00000588671 RETP07949 1114 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 NCAM1P13591 858 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
PCSK4-208ENST00000588671 TIE1P35590 1138 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 GPD2P43304 727 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 KDSRQ06136 332 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 TRIP4Q15650 581 aaPredicted RBP17.22■□□□□ 0.35
PCSK4-208ENST00000588671 GAB4Q2WGN9 574 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 MPPE1Q53F39 396 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 C10orf76Q5T2E6 689 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 RBM43Q6ZSC3 357 aaKnown RBP17.22■□□□□ 0.35
PCSK4-208ENST00000588671 BEND5Q7L4P6 421 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 CCDC117Q8IWD4 279 aaPredicted RBP17.22■□□□□ 0.35
PCSK4-208ENST00000588671 TERB1Q8NA31 727 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 GPT2Q8TD30 523 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 DDI1Q8WTU0 396 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 SHC3Q92529 594 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 EDEM1Q92611 657 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 LOXL4Q96JB6 756 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 SERPINB11Q96P15 392 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 MIS12Q9H081 205 aa17.22■□□□□ 0.35
PCSK4-208ENST00000588671 AGO1Q9UL18 857 aaKnown RBP17.22■□□□□ 0.35
PCSK4-208ENST00000588671 HELZP42694 1942 aaKnown RBP17.21■□□□□ 0.35
PCSK4-208ENST00000588671 TYW5A2RUC4 315 aaKnown RBP17.21■□□□□ 0.35
PCSK4-208ENST00000588671 RHOBTB1O94844 696 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 KLF8O95600 359 aaPredicted RBP17.21■□□□□ 0.35
PCSK4-208ENST00000588671 MTA1Q13330 715 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 ELF2Q15723 593 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 CRY1Q16526 586 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 NAIF1Q69YI7 327 aaPredicted RBP17.21■□□□□ 0.35
PCSK4-208ENST00000588671 MSANTD2Q6P1R3 559 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 SCUBE3Q8IX30 993 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 ZNF513Q8N8E2 541 aaPredicted RBP17.21■□□□□ 0.35
PCSK4-208ENST00000588671 MSANTD4Q8NCY6 345 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 LHX5Q9H2C1 402 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 SYNCQ9H7C4 482 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 SLC12A6Q9UHW9 1150 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 STARD13Q9Y3M8 1113 aa17.21■□□□□ 0.35
PCSK4-208ENST00000588671 RIF1Q5UIP0 2472 aaKnown RBP17.2■□□□□ 0.34
PCSK4-208ENST00000588671 IRAK2O43187 625 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 HRO43593 1189 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 GLI1P08151 1106 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 PTMSP20962 102 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 RPL34P49207 117 aaKnown RBP17.2■□□□□ 0.34
PCSK4-208ENST00000588671 MYL5Q02045 173 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 ARID5AQ03989 594 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 RING1Q06587 406 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 NNTQ13423 1086 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 RAPGEF1Q13905 1077 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 EFHC1Q5JVL4 640 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 ADGRF1Q5T601 910 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 PKN3Q6P5Z2 889 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 TMEM110Q86TL2 294 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 C12orf40Q86WS4 652 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 DCLK2Q8N568 766 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 CCDC33Q8N5R6 958 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 TXNDC5Q8NBS9 432 aaKnown RBP17.2■□□□□ 0.34
PCSK4-208ENST00000588671 IPO4Q8TEX9 1081 aaKnown RBP17.2■□□□□ 0.34
PCSK4-208ENST00000588671 NDRG1Q92597 394 aaKnown RBP17.2■□□□□ 0.34
PCSK4-208ENST00000588671 AZIN2Q96A70 460 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 TMA16Q96EY4 203 aaKnown RBP17.2■□□□□ 0.34
PCSK4-208ENST00000588671 HHIPQ96QV1 700 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 ZSWIM1Q9BR11 485 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 SLC4A5Q9BY07 1137 aa17.2■□□□□ 0.34
PCSK4-208ENST00000588671 SAMSN1Q9NSI8 373 aaKnown RBP17.2■□□□□ 0.34
PCSK4-208ENST00000588671 BCCIPQ9P287 314 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCSK4-208ENST00000588671 SFMBT1Q9UHJ3 866 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms