RNA–Protein interactions for RNA: ENST00000588620.5

MRPL38-217, Transcript of mitochondrial ribosomal protein L38, human

TSL 3

Gene MRPL38, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL38-217	ENST00000588620	HHIP	Q96QV1	700 aa		13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	LSM14B	Q9BX40	385 aa	Known RBP	13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	EPC1	Q9H2F5	836 aa		13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	PDCL3	Q9H2J4	239 aa		13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	MARK1	Q9P0L2	795 aa		13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	AGO1	Q9UL18	857 aa	Known RBP	13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	SMG5	Q9UPR3	1016 aa	Known RBP	13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	HBS1L	Q9Y450	684 aa	Known RBP	13.45	□□□□□ -0.26
MRPL38-217	ENST00000588620	ATG2B	Q96BY7	2078 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	MYOF	Q9NZM1	2061 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	KIAA1549L	Q6ZVL6	1849 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	FOXN3	O00409	490 aa	Predicted RBP	13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	CAPN9	O14815	690 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	GABBR2	O75899	941 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	APBB3	O95704	486 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	CDK11B	P21127	795 aa	Known RBP	13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	HOXA6	P31267	233 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	KRT9	P35527	623 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	BPIFB4	P59827	614 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	MYL5	Q02045	173 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	KCNMA1	Q12791	1236 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	SIM2	Q14190	667 aa	Predicted RBP	13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	FKBP15	Q5T1M5	1219 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	C10orf76	Q5T2E6	689 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	SMYD5	Q6GMV2	418 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	CEP68	Q76N32	757 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	WDR5B	Q86VZ2	330 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	PASD1	Q8IV76	773 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	TERB1	Q8NA31	727 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	SUMF1	Q8NBK3	374 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	TSTD1	Q8NFU3	115 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	STK32A	Q8WU08	396 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	RUBCN	Q92622	972 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	NOX5	Q96PH1	765 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	TRIM62	Q9BVG3	475 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	FANCL	Q9NW38	375 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	PLK2	Q9NYY3	685 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620	CEP83	Q9Y592	693 aa		13.44	□□□□□ -0.26
MRPL38-217	ENST00000588620		A0A0A0MRY4	1105 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620		E5RJQ4	531 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	MSI1	O43347	362 aa	Known RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	CACNG3	O60359	315 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	KLF8	O95600	359 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	PNMA6A	P0CW24	399 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	NCAM1	P13591	858 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	HOXC13	P31276	330 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	DGKG	P49619	791 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	MESP2	Q0VG99	397 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	SRSF5	Q13243	272 aa	Known RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	PDCL	Q13371	301 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	DRAP1	Q14919	205 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	KRT31	Q15323	416 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	TRIP4	Q15650	581 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	LPAL2	Q16609	132 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	HSF5	Q4G112	596 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	EOGT	Q5NDL2	527 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	EMC10	Q5UCC4	262 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	KLHDC7A	Q5VTJ3	777 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	CDKAL1	Q5VV42	579 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	MSANTD2	Q6P1R3	559 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	TRMT11	Q7Z4G4	463 aa	Known RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	SFTPA1	Q8IWL2	248 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	CPXM2	Q8N436	756 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	ALLC	Q8N6M5	410 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	DDI1	Q8WTU0	396 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	SLC4A5	Q9BY07	1137 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	NAT10	Q9H0A0	1025 aa	Known RBP	13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	GMEB2	Q9UKD1	530 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	MMP17	Q9ULZ9	603 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	FHOD1	Q9Y613	1164 aa		13.43	□□□□□ -0.26
MRPL38-217	ENST00000588620	CCDC163	A0A0D9SF12	145 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	ANTXRL	A6NF34	631 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	TRIM24	O15164	1050 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	AXIN1	O15169	862 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	HR	O43593	1189 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	ALDH1A2	O94788	518 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	CLCN1	P35523	988 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	RPL34	P49207	117 aa	Known RBP	13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	DGKE	P52429	567 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	TBX4	P57082	545 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	SNX16	P57768	344 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	TYRO3	Q06418	890 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	SDE2	Q6IQ49	451 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	TMEM110	Q86TL2	294 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	SLC47A2	Q86VL8	602 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	UNC45B	Q8IWX7	931 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	FAM71A	Q8IYT1	594 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	PHTF2	Q8N3S3	785 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	TXNDC5	Q8NBS9	432 aa	Known RBP	13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	PPP1R13B	Q96KQ4	1090 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	SERPINB11	Q96P15	392 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	SYNC	Q9H7C4	482 aa		13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	POLM	Q9NP87	494 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL38-217	ENST00000588620	ZDHHC4	Q9NPG8	344 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms