RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 ACOX2Q99424 681 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 PLK2Q9NYY3 685 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 SPEGQ15772 3267 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 NUMA1Q14980 2115 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 A0A1W2PQF6 199 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 TULP2O00295 520 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 HMBSP08397 361 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 DGKGP49619 791 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 GOLGA7BQ2TAP0 167 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 ARMCX6Q7L4S7 300 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 LPCAT2Q7L5N7 544 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 TMEFF1Q8IYR6 380 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 CHPFQ8IZ52 775 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 ANKRD52Q8NB46 1076 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 CALCOCO1Q9P1Z2 691 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 ARMCX3Q9UH62 379 aaPredicted RBP19.71■□□□□ 0.75
TRIM47-205ENST00000587774 TSPAN16Q9UKR8 245 aa19.71■□□□□ 0.75
TRIM47-205ENST00000587774 AKAP13Q12802 2813 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 KHNYNO15037 678 aaKnown RBP19.7■□□□□ 0.74
TRIM47-205ENST00000587774 CORO1AP31146 461 aaKnown RBP19.7■□□□□ 0.74
TRIM47-205ENST00000587774 PTGER3P43115 390 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 TKTL1P51854 596 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 BCAT1P54687 386 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 YWHAGP61981 247 aaKnown RBP eCLIP19.7■□□□□ 0.74
TRIM47-205ENST00000587774 NUCB2P80303 420 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 BHLHA9Q7RTU4 235 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 ARHGAP18Q8N392 663 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 PIGKQ92643 395 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 ERLEC1Q96DZ1 483 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 TIGD1Q96MW7 591 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 LSM14BQ9BX40 385 aaKnown RBP19.7■□□□□ 0.74
TRIM47-205ENST00000587774 UBXN6Q9BZV1 441 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 CD248Q9HCU0 757 aa19.7■□□□□ 0.74
TRIM47-205ENST00000587774 ATXN2Q99700 1313 aaKnown RBP19.7■□□□□ 0.74
TRIM47-205ENST00000587774 MAP3K13O43283 966 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 CISD3P0C7P0 127 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 SLC8A3P57103 927 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 COG7P83436 770 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 PDE4CQ08493 712 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 SGO2Q562F6 1265 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 FYB2Q5VWT5 728 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 ISM2Q6H9L7 571 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 KIAA1211LQ6NV74 962 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 RSRC2Q7L4I2 434 aaKnown RBP19.69■□□□□ 0.74
TRIM47-205ENST00000587774 UBR7Q8N806 425 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 GABRG3Q99928 467 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 ULBP1Q9BZM6 244 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 MARCH2Q9P0N8 246 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 HOOK1Q9UJC3 728 aaKnown RBP19.69■□□□□ 0.74
TRIM47-205ENST00000587774 ZNF510Q9Y2H8 683 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 RAD54BQ9Y620 910 aa19.69■□□□□ 0.74
TRIM47-205ENST00000587774 C4orf47A7E2U8 309 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 PSMA7O14818 248 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 XPO1O14980 1071 aaKnown RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 ZBED1O96006 694 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 PENKP01210 267 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 CD44P16070 742 aaKnown RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 NDUFV2P19404 249 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 FMO5P49326 533 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 YWHAEP62258 255 aaKnown RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 ADIGQ0VDE8 80 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 BST2Q10589 180 aaKnown RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 LRMPQ12912 555 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 BYSLQ13895 437 aaKnown RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 PM20D1Q6GTS8 502 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 IPO4Q8TEX9 1081 aaKnown RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 NDRG1Q92597 394 aaKnown RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 GTPBP4Q9BZE4 634 aaKnown RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 DCLK3Q9C098 648 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 TMEM74BQ9NUR3 256 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 CACNA2D2Q9NY47 1150 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 FBXO10Q9UK96 956 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 MAN1B1Q9UKM7 699 aa19.68■□□□□ 0.74
TRIM47-205ENST00000587774 AGO1Q9UL18 857 aaKnown RBP19.68■□□□□ 0.74
TRIM47-205ENST00000587774 KCNK5O95279 499 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 CD19P15391 556 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 TBXAS1P24557 533 aaPredicted RBP19.67■□□□□ 0.74
TRIM47-205ENST00000587774 CHKAP35790 457 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 IRX4P78413 519 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 RPL6Q02878 288 aaKnown RBP19.67■□□□□ 0.74
TRIM47-205ENST00000587774 STIM1Q13586 685 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 N4BP2L1Q5TBK1 243 aaPredicted RBP19.67■□□□□ 0.74
TRIM47-205ENST00000587774 LYSMD4Q5XG99 296 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 SDE2Q6IQ49 451 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 DENND1CQ8IV53 801 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 TMEM9BQ9NQ34 198 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 HESX1Q9UBX0 185 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 STRIP2Q9ULQ0 834 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 PLXNA2O75051 1894 aa19.67■□□□□ 0.74
TRIM47-205ENST00000587774 CFAP47Q6ZTR5 3102 aa19.66■□□□□ 0.74
TRIM47-205ENST00000587774 SLC12A8A0AV02 714 aa19.66■□□□□ 0.74
TRIM47-205ENST00000587774 O00370 1275 aa19.66■□□□□ 0.74
TRIM47-205ENST00000587774 CDX4O14627 284 aaPredicted RBP19.66■□□□□ 0.74
TRIM47-205ENST00000587774 MFAP3P55082 362 aa19.66■□□□□ 0.74
TRIM47-205ENST00000587774 GEN1Q17RS7 908 aa19.66■□□□□ 0.74
TRIM47-205ENST00000587774 TRIM61Q5EBN2 209 aa19.66■□□□□ 0.74
TRIM47-205ENST00000587774 SPDYCQ5MJ68 293 aa19.66■□□□□ 0.74
TRIM47-205ENST00000587774 PSAPL1Q6NUJ1 521 aa19.66■□□□□ 0.74
TRIM47-205ENST00000587774 SYT12Q8IV01 421 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms