RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 EFHC2Q5JST6 749 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 CFAP58Q5T655 872 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 C1orf228Q6PIY5 440 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 NPNTQ6UXI9 565 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 RSPO2Q6UXX9 243 aaPredicted RBP20.62■□□□□ 0.89
TRIM47-204ENST00000587339 TMCO2Q7Z6W1 182 aaPredicted RBP20.62■□□□□ 0.89
TRIM47-204ENST00000587339 PRUNE1Q86TP1 453 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 NUP93Q8N1F7 819 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 PYROXD2Q8N2H3 581 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 BBOF1Q8ND07 529 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 IGSF21Q96ID5 467 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 CSPG4P5Q96PW8 444 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 WDR6Q9NNW5 1121 aaKnown RBP20.62■□□□□ 0.89
TRIM47-204ENST00000587339 ABCC13Q9NSE7 274 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 CWC15Q9P013 229 aaKnown RBP20.62■□□□□ 0.89
TRIM47-204ENST00000587339 PATJQ8NI35 1801 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 IFNB1P01574 187 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 USP41Q3LFD5 358 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 SDHAF4Q5VUM1 108 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 PRSS55Q6UWB4 352 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-204ENST00000587339 GLIS1Q8NBF1 620 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 SPPL2BQ8TCT7 592 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 RSAD2Q8WXG1 361 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 NTAN1Q96AB6 310 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 ZNF689Q96CS4 500 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-204ENST00000587339 TMPRSS4Q9NRS4 437 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 RCOR3Q9P2K3 495 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-204ENST00000587339 ATP8A1Q9Y2Q0 1164 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 HEY1Q9Y5J3 304 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 MTMR11A4FU01 709 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 TP73O15350 636 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 ZFXP17010 805 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-204ENST00000587339 GOT1P17174 413 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 ADRA1BP35368 520 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 GGCXP38435 758 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 GPR15P49685 360 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 ITGA8P53708 1063 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 WDR5P61964 334 aaKnown RBP20.61■□□□□ 0.89
TRIM47-204ENST00000587339 CAV1Q03135 178 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 MTMR3Q13615 1198 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 BTBD8Q5XKL5 378 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 KCNT2Q6UVM3 1135 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 ZC3H18Q86VM9 953 aaKnown RBP20.61■□□□□ 0.89
TRIM47-204ENST00000587339 TTC9BQ8N6N2 239 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 RUFY1Q96T51 708 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 FBXO44Q9H4M3 255 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 C10orf88Q9H8K7 445 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 MED4Q9NPJ6 270 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 ANAPC5Q9UJX4 755 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 FBXW11Q9UKB1 542 aa20.61■□□□□ 0.89
TRIM47-204ENST00000587339 LTBP2Q14767 1821 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 PPFIA2O75334 1257 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 EFEMP2O95967 443 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 ZSCAN5DPP0CG00 497 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 ACRP10323 421 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 HSD17B3P37058 310 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 CBX1P83916 185 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 P3H1Q32P28 736 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 ARL13BQ3SXY8 428 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 RNF19BQ6ZMZ0 732 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 IQCKQ8N0W5 287 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 DQX1Q8TE96 717 aaKnown RBP20.6■□□□□ 0.89
TRIM47-204ENST00000587339 WDCPQ9H6R7 721 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 PCDH9Q9HC56 1237 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 CDY1Q9Y6F8 540 aa20.6■□□□□ 0.89
TRIM47-204ENST00000587339 H3BQF6 201 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 AGPSO00116 658 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 ETS1P14921 441 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 ROR1Q01973 937 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 SCAPQ12770 1279 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 BTG3Q14201 252 aaPredicted RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 MGAT5BQ3V5L5 792 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 IZUMO3Q5VZ72 239 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 KIAA1841Q6NSI8 718 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 DARS2Q6PI48 645 aaKnown RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 TAC4Q86UU9 113 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 STKLD1Q8NE28 680 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 FBXO22Q8NEZ5 403 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 RNF139Q8WU17 664 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 UBLCP1Q8WVY7 318 aaPredicted RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 RIN2Q8WYP3 895 aaPredicted RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 ZIM3Q96PE6 472 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 SCML2Q9UQR0 700 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 SLC27A5Q9Y2P5 690 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 COL4A6Q14031 1691 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 OAS2P29728 719 aaKnown RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 STIP1P31948 543 aaKnown RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 GDF10P55107 478 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 GPS1Q13098 491 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 SCD5Q86SK9 330 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 RNF168Q8IYW5 571 aaPredicted RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 C2orf15Q8WU43 125 aaKnown RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 ZNF558Q96NG5 402 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 SEPT5Q99719 369 aaPredicted RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 TXLNGYQ9BZA5 131 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 RC3H2Q9HBD1 1191 aaKnown RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 PCDH10Q9P2E7 1040 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 MTRRQ9UBK8 725 aa20.59■□□□□ 0.89
TRIM47-204ENST00000587339 COL4A4P53420 1690 aaPredicted RBP20.59■□□□□ 0.89
TRIM47-204ENST00000587339 H3BRJ5 948 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms