RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 WWOXQ9NZC7 414 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 USP22Q9UPT9 525 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 PAXBP1Q9Y5B6 917 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 NRXN3Q9Y4C0 1643 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 FMN1Q68DA7 1419 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 CASKIN1Q8WXD9 1431 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 XRN1Q8IZH2 1706 aaKnown RBP3.5□□□□□ -1.85
VAPA-208ENST00000584796 DHX29Q7Z478 1369 aaKnown RBP3.5□□□□□ -1.85
VAPA-208ENST00000584796 ASXL1Q8IXJ9 1541 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 NKTRP30414 1462 aaKnown RBP3.49□□□□□ -1.85
VAPA-208ENST00000584796 CCDC18Q5T9S5 1454 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 LOC105371045A0A1W2PR82 267 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 CD3EAPO15446 510 aaKnown RBP3.49□□□□□ -1.85
VAPA-208ENST00000584796 SRGAP2O75044 1071 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 IGSF3O75054 1194 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 CREB1P16220 341 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 ME1P48163 572 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 AGFG1P52594 562 aaKnown RBP3.49□□□□□ -1.85
VAPA-208ENST00000584796 CFHR3Q02985 330 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 ERV3-1Q14264 604 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 KCNB1Q14721 858 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 VSTM1Q6UX27 236 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 ZDHHC24Q6UX98 284 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 ANKRD13BQ86YJ7 626 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.49□□□□□ -1.85
VAPA-208ENST00000584796 MPP5Q8N3R9 675 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 ZNF548Q8NEK5 533 aaPredicted RBP3.49□□□□□ -1.85
VAPA-208ENST00000584796 KAZALD1Q96I82 304 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 AIFM3Q96NN9 605 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 RHOBTB2Q9BYZ6 727 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 ZNF518BQ9C0D4 1074 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 ATP6V0A4Q9HBG4 840 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 AASDHPPTQ9NRN7 309 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 PNMA8BQ9ULN7 279 aaPredicted RBP3.49□□□□□ -1.85
VAPA-208ENST00000584796 MAFFQ9ULX9 164 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 KIAA1107Q9UPP5 1409 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 ABCA3Q99758 1704 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 ADGRB3O60242 1522 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 EFCAB6Q5THR3 1501 aa3.49□□□□□ -1.85
VAPA-208ENST00000584796 TMEM131LA2VDJ0 1609 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 LAMC1P11047 1609 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 FYCO1Q9BQS8 1478 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 ARHGEF5Q12774 1597 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 PTPRUQ92729 1446 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 PHGDHO43175 533 aaKnown RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 CCP110O43303 1012 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 SMAD6O43541 496 aaKnown RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 TBC1D4O60343 1298 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 CRYABP02511 175 aaKnown RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 KITP10721 976 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 MTHFSP49914 203 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 HSF1Q00613 529 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 INSCQ1MX18 579 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 DEFB132Q7Z7B7 95 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 MICU3Q86XE3 530 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 OR56A3Q8NH54 315 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 IL31RAQ8NI17 732 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 PPP1R35Q8TAP8 253 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 MPLKIPQ8TAP9 179 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 WIPF2Q8TF74 440 aaPredicted RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 SPSB4Q96A44 273 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 EDC3Q96F86 508 aaKnown RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 TAAR9Q96RI9 348 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 PPP1R9BQ96SB3 815 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 ACO2Q99798 780 aaKnown RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 TRMOQ9BU70 441 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 NMRK2Q9NPI5 230 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 A1CFQ9NQ94 594 aaKnown RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 MGAT4CQ9UBM8 478 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 HS3ST3B1Q9Y662 390 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 PLCH1Q4KWH8 1693 aa3.48□□□□□ -1.85
VAPA-208ENST00000584796 RGPD8O14715 1765 aaPredicted RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 COL22A1Q8NFW1 1626 aaPredicted RBP3.48□□□□□ -1.85
VAPA-208ENST00000584796 CCDC141Q6ZP82 1450 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 PLEKHH2Q8IVE3 1493 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 NUP188Q5SRE5 1749 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 UNC13BO14795 1591 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 FGD6Q6ZV73 1430 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 LOC102723971A0A1B0GUV8 181 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 MBD3L4A6NDZ8 208 aaPredicted RBP3.47□□□□□ -1.85
VAPA-208ENST00000584796 MBD3L3A6NE82 208 aaPredicted RBP3.47□□□□□ -1.85
VAPA-208ENST00000584796 B4DGG1 531 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 H3BNX3 289 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 TBX3O15119 743 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 RRP9O43818 475 aaKnown RBP3.47□□□□□ -1.85
VAPA-208ENST00000584796 TULP3O75386 442 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 HMGB1P09429 215 aaKnown RBP3.47□□□□□ -1.85
VAPA-208ENST00000584796 HSPA6P17066 643 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 MCM5P33992 734 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 YPEL5P62699 121 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 SEMA3AQ14563 771 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 SLC9C1Q4G0N8 1177 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 ANO6Q4KMQ2 910 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 KCTD20Q7Z5Y7 419 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 PIM3Q86V86 326 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 COL23A1Q86Y22 540 aaPredicted RBP3.47□□□□□ -1.85
VAPA-208ENST00000584796 CHPFQ8IZ52 775 aa3.47□□□□□ -1.85
VAPA-208ENST00000584796 PELI3Q8N2H9 469 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms