RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 TMEM196Q5HYL7 178 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 FAM90A2PQ658T7 463 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 ZNF813Q6ZN06 617 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 TTC30AQ86WT1 665 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 RASGRP3Q8IV61 690 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 SAMD3Q8N6K7 520 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 ZNF398Q8TD17 642 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 VOPP1Q96AW1 172 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 SLC39A13Q96H72 371 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 HIC2Q96JB3 615 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 C5orf34Q96MH7 638 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 SEMA5BQ9P283 1151 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 MAFFQ9ULX9 164 aa4.52□□□□□ -1.69
SKA2-210ENST00000584089 SPATA31A1Q5TZJ5 1347 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 PPP6CO00743 305 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 DHHO43323 396 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 NTSR2O95665 410 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 CYP2D6P10635 497 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 MMP8P22894 467 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 SERPINB3P29508 390 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 GALNSP34059 522 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 SEMA3BQ13214 749 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 MFSD13AQ14CX5 517 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 CEP78Q5JTW2 689 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 RANBP10Q6VN20 620 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 GALNT16Q8N428 558 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 PNISRQ8TF01 805 aaKnown RBP4.51□□□□□ -1.69
SKA2-210ENST00000584089 DDB2Q92466 427 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 MUL1Q969V5 352 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 C18orf8Q96DM3 657 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 PRR11Q96HE9 360 aaPredicted RBP4.51□□□□□ -1.69
SKA2-210ENST00000584089 SAP30LQ9HAJ7 183 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 LRCH1Q9Y2L9 728 aa4.51□□□□□ -1.69
SKA2-210ENST00000584089 ABHD14A-ACY1A0A1B0GW23 586 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 GOLGA6L3A6NEY3 463 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 FYB1O15117 783 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 MBPP02686 304 aaPredicted RBP4.5□□□□□ -1.69
SKA2-210ENST00000584089 DUSP1P28562 367 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 GSTM5P46439 218 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 JAK3P52333 1124 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 BFSP2Q13515 415 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 STARD3Q14849 445 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 TRIM71Q2Q1W2 868 aaKnown RBP4.5□□□□□ -1.69
SKA2-210ENST00000584089 CCDC144NLQ6NUI1 221 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 PIK3AP1Q6ZUJ8 805 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 ADGRE3Q9BY15 652 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 WDR12Q9GZL7 423 aaKnown RBP4.5□□□□□ -1.69
SKA2-210ENST00000584089 ABHD10Q9NUJ1 306 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 SLC52A1Q9NWF4 448 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 IGSF9Q9P2J2 1179 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 CDC23Q9UJX2 597 aa4.5□□□□□ -1.69
SKA2-210ENST00000584089 SETD1BQ9UPS6 1966 aaKnown RBP4.5□□□□□ -1.69
SKA2-210ENST00000584089 WDR17Q8IZU2 1322 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 PNMA6EA0A0J9YXQ4 647 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 J3KTA2 159 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 PCDH17O14917 1159 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 FFAR2O15552 330 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 CTIFO43310 598 aaKnown RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 RNF8O76064 485 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 NPPBP16860 134 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 MATN1P21941 496 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 EPHB2P29323 1055 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 MPGP29372 298 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 IGHMBP2P38935 993 aaKnown RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 IL6STP40189 918 aaPredicted RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 WDR5P61964 334 aaKnown RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 RAE1P78406 368 aaKnown RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 TNFAIP2Q03169 654 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 MORC3Q14149 939 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 CSHL1Q14406 222 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 EZH2Q15910 746 aaKnown RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 SRSF7Q16629 238 aaKnown RBP eCLIP4.49□□□□□ -1.69
SKA2-210ENST00000584089 AWAT1Q58HT5 328 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 CC2D1BQ5T0F9 858 aaKnown RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 MIS18BP1Q6P0N0 1132 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 PGBD2Q6P3X8 592 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 NEK8Q86SG6 692 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 C16orf71Q8IYS4 520 aaPredicted RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 IPO4Q8TEX9 1081 aaKnown RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 EIF3CQ99613 913 aaKnown RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 EFHD1Q9BUP0 239 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 RNF26Q9BY78 433 aaPredicted RBP4.49□□□□□ -1.69
SKA2-210ENST00000584089 KRTAP9-8Q9BYQ0 159 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 PCDHB2Q9Y5E7 798 aa4.49□□□□□ -1.69
SKA2-210ENST00000584089 A0A087WV62 115 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 TTC34A8MYJ7 566 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 PIP5K1BO14986 540 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 NPC1O15118 1278 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 TAF5LO75529 589 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 ANXA6P08133 673 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 PRR35P0CG20 571 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 KELP23276 732 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 ABCG1P45844 678 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 SLC14A1Q13336 389 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 CNGA3Q16281 694 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 PFKFB3Q16875 520 aaPredicted RBP4.48□□□□□ -1.69
SKA2-210ENST00000584089 P3H1Q32P28 736 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 MEX3CQ5U5Q3 659 aaKnown RBP4.48□□□□□ -1.69
SKA2-210ENST00000584089 SLC18B1Q6NT16 456 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms