RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 GPR142Q7Z601 462 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MTDHQ86UE4 582 aaKnown RBP12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 LURAP1LQ8IV03 231 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RNF149Q8NC42 400 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TMEM174Q8WUU8 243 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 AFG1LQ8WV93 481 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MAGEB18Q96M61 343 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 LRRC37BQ96QE4 947 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RNPEPQ9H4A4 650 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TUBA8Q9NY65 449 aaPredicted RBP12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PAPPA2Q9BXP8 1791 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MYH9P35579 1960 aaKnown RBP12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 H0YC42 278 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TSPAN6O43657 245 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 GARTP22102 1010 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 GBP1P32455 592 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CLCN3P51790 818 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 GDF10P55107 478 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 MYL6P60660 151 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 FOXK1P85037 733 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CENPCQ03188 943 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 PTP4A2Q12974 167 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TFDP1Q14186 410 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 PSMD6Q15008 389 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CLUL1Q15846 466 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CCNG2Q16589 344 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 PLEKHG4Q58EX7 1191 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 ANKRD22Q5VYY1 191 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CCDC77Q9BR77 488 aa12.02□□□□□ -0.49
CDK5RAP3-231ENST00000584063 DNAJC25-GNG10A0A024R161 153 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 INO80B-WBP1J3KQ70 363 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 UNC5CO95185 931 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 ATP5DP30049 168 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 GCLCP48506 637 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 ROR1Q01973 937 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 KLF1Q13351 362 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 MAPK6Q16659 721 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 MSS51Q4VC12 460 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 ASRGL1Q7L266 308 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TMEM192Q8IY95 271 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CARNMT1Q8N4J0 409 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CCDC33Q8N5R6 958 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 AADATQ8N5Z0 425 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 RFWD2Q8NHY2 731 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 DTX3LQ8TDB6 740 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 FBF1Q8TES7 1133 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TFAP2BQ92481 460 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 MAML1Q92585 1016 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 LENG1Q96BZ8 264 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 SLC17A7Q9P2U7 560 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 FBXO10Q9UK96 956 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 ABT1Q9ULW3 272 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 IPPQ9Y573 584 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CNTNAP2Q9UHC6 1331 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TCRBV7S3A2A0A539 114 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 ASB14A6NK59 587 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 NCOA4Q13772 614 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 IL31Q6EBC2 164 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TRABD2AQ86V40 505 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 RHOT1Q8IXI2 618 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 ABRAQ8N0Z2 381 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 FAM13CQ8NE31 585 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 LRRC8CQ8TDW0 803 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 SMC6Q96SB8 1091 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TBCBQ99426 244 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 PARK7Q99497 189 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TIPINQ9BVW5 301 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TBC1D10AQ9BXI6 508 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 FBXO6Q9NRD1 293 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 SMYD2Q9NRG4 433 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 POLIQ9UNA4 740 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TTLL3Q9Y4R7 772 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 MAP3K13O43283 966 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 B4GALT5O43286 388 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 T-ENOLP0DO92 83 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CYP2B6P20813 491 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CAMK2BQ13554 666 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 RAB6CQ53S08 254 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 DCUN1D2Q6PH85 259 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 OTOAQ7RTW8 1153 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 LRRC6Q86X45 466 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 EMC1Q8N766 993 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 MAGEC3Q8TD91 643 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 GRK7Q8WTQ7 553 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 ZNF606Q8WXB4 792 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 RAB6CQ9H0N0 254 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 SIRT5Q9NXA8 310 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 EDARQ9UNE0 448 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 WDR81Q562E7 1941 aa12.01□□□□□ -0.49
CDK5RAP3-231ENST00000584063 LAMA2P24043 3122 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-231ENST00000584063 ASMTLO95671 621 aa12□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CES1P23141 567 aa12□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CCND1P24385 295 aa12□□□□□ -0.49
CDK5RAP3-231ENST00000584063 TUBP50607 506 aa12□□□□□ -0.49
CDK5RAP3-231ENST00000584063 NEK3P51956 506 aa12□□□□□ -0.49
CDK5RAP3-231ENST00000584063 CDH8P55286 799 aa12□□□□□ -0.49
CDK5RAP3-231ENST00000584063 WDR72Q3MJ13 1102 aa12□□□□□ -0.49
CDK5RAP3-231ENST00000584063 FNBP1LQ5T0N5 605 aa12□□□□□ -0.49
CDK5RAP3-231ENST00000584063 THNSL1Q8IYQ7 743 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms