RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	TMEM120A	Q9BXJ8	343 aa		5.06	□□□□□ -1.6
NUP85-222	ENST00000583569	KLK15	Q9H2R5	256 aa		5.06	□□□□□ -1.6
NUP85-222	ENST00000583569	IKZF4	Q9H2S9	585 aa		5.06	□□□□□ -1.6
NUP85-222	ENST00000583569	INSL6	Q9Y581	213 aa		5.06	□□□□□ -1.6
NUP85-222	ENST00000583569	WDR33	Q9C0J8	1336 aa	Known RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	HMX3	A6NHT5	357 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	ZNF213	O14771	459 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	CTIF	O43310	598 aa	Known RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	CER1	O95813	267 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	MMP8	P22894	467 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	PPM1F	P49593	454 aa	Predicted RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	AP2B1	P63010	937 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	CCDC15	Q0P6D6	951 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	DNASE1L3	Q13609	305 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	BTBD16	Q32M84	506 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	FAM90A2P	Q658T7	463 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	JMJD6	Q6NYC1	403 aa	Predicted RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	MSANTD2	Q6P1R3	559 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	ARHGEF25	Q86VW2	580 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	GALNT15	Q8N3T1	639 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	C12orf76	Q8N812	135 aa	Predicted RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	TERB1	Q8NA31	727 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	STT3B	Q8TCJ2	826 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	RSC1A1	Q92681	617 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	DAZAP1	Q96EP5	407 aa	Known RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	PRR11	Q96HE9	360 aa	Predicted RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	HS6ST2	Q96MM7	605 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	BBC3	Q96PG8	261 aa	Predicted RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	BRD8	Q9H0E9	1235 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	SYNPO2L	Q9H987	977 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	SAP30L	Q9HAJ7	183 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	MLXIP	Q9HAP2	919 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	ALG13	Q9NP73	1137 aa	Known RBP	5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	FBXO28	Q9NVF7	368 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	SH3BP4	Q9P0V3	963 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	NFU1	Q9UMS0	254 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	VPS4A	Q9UN37	437 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	PCDHB2	Q9Y5E7	798 aa		5.05	□□□□□ -1.6
NUP85-222	ENST00000583569	IPO5	O00410	1097 aa	Known RBP	5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	AKAP8	O43823	692 aa	Known RBP	5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	PPP6R2	O75170	966 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	RPP40	O75818	363 aa	Known RBP	5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	JTB	O76095	146 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	ALAD	P13716	330 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	VEGFA	P15692	232 aa	Predicted RBP	5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	WT1	P19544	449 aa	Predicted RBP	5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	GPC5	P78333	572 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	HOXA4	Q00056	320 aa	Predicted RBP	5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	POSTN	Q15063	836 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	ZNF569	Q5MCW4	686 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	TANGO2	Q6ICL3	276 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	LDHAL6A	Q6ZMR3	332 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	TRIM72	Q6ZMU5	477 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	RAB11FIP2	Q7L804	512 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	TRABD2A	Q86V40	505 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	SLC44A2	Q8IWA5	706 aa	Predicted RBP	5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	SCAMP5	Q8TAC9	235 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	SLC22A17	Q8WUG5	538 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	TBC1D20	Q96BZ9	403 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	SNX18	Q96RF0	628 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	AGAP2	Q99490	1192 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	FAM167B	Q9BTA0	163 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	PABPC3	Q9H361	631 aa	Known RBP	5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	TMPRSS5	Q9H3S3	457 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	PRDM8	Q9NQV8	689 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	VPS45	Q9NRW7	570 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	ZNHIT2	Q9UHR6	403 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	ADAM21	Q9UKJ8	722 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	PCDHB7	Q9Y5E2	793 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	PCDHGB3	Q9Y5G1	929 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	WNT6	Q9Y6F9	365 aa		5.04	□□□□□ -1.6
NUP85-222	ENST00000583569	CCDC187	A0A096LP49	1063 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	TARM1	B6A8C7	271 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	KIF28P	B7ZC32	967 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	PRAMEF2	O60811	474 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	DHRS4L1	P0CG22	281 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	GALNS	P34059	522 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	IGHMBP2	P38935	993 aa	Known RBP	5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	PTH2R	P49190	550 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	RENBP	P51606	427 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	PNLIPRP1	P54315	467 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	COL10A1	Q03692	680 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	CBFB	Q13951	182 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	RPS6KA2	Q15349	733 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	NFRKB	Q6P4R8	1299 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	SERPINA13P	Q6UXR4	307 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	RFX8	Q6ZV50	586 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	BCDIN3D	Q7Z5W3	292 aa	Known RBP	5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	MYRIP	Q8NFW9	859 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	MAFA	Q8NHW3	353 aa	Predicted RBP	5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	HMGB4	Q8WW32	186 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	SARAF	Q96BY9	339 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	MCRS1	Q96EZ8	462 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	EDC3	Q96F86	508 aa	Known RBP	5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	SORCS2	Q96PQ0	1159 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	ISCA1	Q9BUE6	129 aa		5.03	□□□□□ -1.6
NUP85-222	ENST00000583569	CCDC134	Q9H6E4	229 aa		5.03	□□□□□ -1.6

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