RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ZNF606Q8WXB4 792 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 SAMSN1Q9NSI8 373 aaKnown RBP20.4■□□□□ 0.86
SREBF1-220ENST00000581707 DNAJC17Q9NVM6 304 aaKnown RBP20.4■□□□□ 0.86
SREBF1-220ENST00000581707 AGO1Q9UL18 857 aaKnown RBP20.4■□□□□ 0.86
SREBF1-220ENST00000581707 MMP17Q9ULZ9 603 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 BECN2A8MW95 431 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 KCNJ18B7U540 433 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 TRIM24O15164 1050 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 CHKAP35790 457 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 KIR2DL1P43626 348 aaPredicted RBP20.39■□□□□ 0.85
SREBF1-220ENST00000581707 KCNJ12Q14500 433 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 TRIP4Q15650 581 aaPredicted RBP20.39■□□□□ 0.85
SREBF1-220ENST00000581707 MEA1Q16626 185 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 HSF5Q4G112 596 aaPredicted RBP20.39■□□□□ 0.85
SREBF1-220ENST00000581707 LAIR1Q6GTX8 287 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 GRAMD4Q6IC98 578 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 DENND1BQ6P3S1 775 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 CEP68Q76N32 757 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 DENND1CQ8IV53 801 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 ALLCQ8N6M5 410 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 TERB1Q8NA31 727 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 IL17RCQ8NAC3 791 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 SHC3Q92529 594 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 GOLGA1Q92805 767 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 BHMTQ93088 406 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 PLD4Q96BZ4 506 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 MIS12Q9H081 205 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 SIX2Q9NPC8 291 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 ACP6Q9NPH0 428 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 ST7Q9NRC1 585 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 SFMBT1Q9UHJ3 866 aa20.39■□□□□ 0.85
SREBF1-220ENST00000581707 HBS1LQ9Y450 684 aaKnown RBP20.39■□□□□ 0.85
SREBF1-220ENST00000581707 PES1O00541 588 aaKnown RBP20.38■□□□□ 0.85
SREBF1-220ENST00000581707 AXIN1O15169 862 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 KLF8O95600 359 aaPredicted RBP20.38■□□□□ 0.85
SREBF1-220ENST00000581707 LTFP02788 710 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 CHRM1P11229 460 aaPredicted RBP20.38■□□□□ 0.85
SREBF1-220ENST00000581707 ACADSBP45954 432 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 RPL34P49207 117 aaKnown RBP20.38■□□□□ 0.85
SREBF1-220ENST00000581707 HARS2P49590 506 aaKnown RBP20.38■□□□□ 0.85
SREBF1-220ENST00000581707 TCP11X2Q5H9J9 407 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 SCUBE3Q8IX30 993 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 KIAA2013Q8IYS2 634 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 TSTD1Q8NFU3 115 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 ENOX1Q8TC92 643 aaKnown RBP20.38■□□□□ 0.85
SREBF1-220ENST00000581707 CLEC4CQ8WTT0 213 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 GAB3Q8WWW8 586 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 EBF1Q9UH73 591 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 DNAJC12Q9UKB3 198 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 GMEB2Q9UKD1 530 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 NFE2L3Q9Y4A8 694 aa20.38■□□□□ 0.85
SREBF1-220ENST00000581707 EML5Q05BV3 1969 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 SDK1Q7Z5N4 2213 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 RPP40O75818 363 aaKnown RBP20.37■□□□□ 0.85
SREBF1-220ENST00000581707 EEF1GP26641 437 aaKnown RBP20.37■□□□□ 0.85
SREBF1-220ENST00000581707 CRY1Q16526 586 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 C10orf76Q5T2E6 689 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 SMYD5Q6GMV2 418 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 MSANTD2Q6P1R3 559 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 TXNDC5Q8NBS9 432 aaKnown RBP20.37■□□□□ 0.85
SREBF1-220ENST00000581707 KCNV2Q8TDN2 545 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 STK32AQ8WU08 396 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 PLK2Q9NYY3 685 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 SPAG17Q6Q759 2223 aa20.37■□□□□ 0.85
SREBF1-220ENST00000581707 SGK1O00141 431 aa20.36■□□□□ 0.85
SREBF1-220ENST00000581707 DGKGP49619 791 aa20.36■□□□□ 0.85
SREBF1-220ENST00000581707 DGKEP52429 567 aa20.36■□□□□ 0.85
SREBF1-220ENST00000581707 EOGTQ5NDL2 527 aa20.36■□□□□ 0.85
SREBF1-220ENST00000581707 SASS6Q6UVJ0 657 aa20.36■□□□□ 0.85
SREBF1-220ENST00000581707 CPXM2Q8N436 756 aa20.36■□□□□ 0.85
SREBF1-220ENST00000581707 SLC4A5Q9BY07 1137 aa20.36■□□□□ 0.85
SREBF1-220ENST00000581707 ZDHHC4Q9NPG8 344 aa20.36■□□□□ 0.85
SREBF1-220ENST00000581707 AJAP1Q9UKB5 411 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-220ENST00000581707 STARD13Q9Y3M8 1113 aa20.36■□□□□ 0.85
SREBF1-220ENST00000581707 FOXN3O00409 490 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-220ENST00000581707 SART1O43290 800 aaKnown RBP20.35■□□□□ 0.85
SREBF1-220ENST00000581707 MSI1O43347 362 aaKnown RBP20.35■□□□□ 0.85
SREBF1-220ENST00000581707 MBD3O95983 291 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 PENKP01210 267 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-220ENST00000581707 CYBBP04839 570 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 RETP07949 1114 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 CISD3P0C7P0 127 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 PTK2Q05397 1052 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 FYB2Q5VWT5 728 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 DPY19L2P1Q6NXN4 242 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 TMEM92Q6UXU6 159 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 TOGARAM2Q6ZUX3 1019 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 CACNA2D4Q7Z3S7 1137 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 TRMT11Q7Z4G4 463 aaKnown RBP20.35■□□□□ 0.85
SREBF1-220ENST00000581707 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-220ENST00000581707 FAM217AQ8IXS0 508 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 GPR161Q8N6U8 529 aaKnown RBP20.35■□□□□ 0.85
SREBF1-220ENST00000581707 ZNF513Q8N8E2 541 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-220ENST00000581707 P2RY11Q96G91 374 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 ANO10Q9NW15 660 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 CYTH4Q9UIA0 394 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 FBXO10Q9UK96 956 aa20.35■□□□□ 0.85
SREBF1-220ENST00000581707 ADAM23O75077 832 aa20.34■□□□□ 0.85
SREBF1-220ENST00000581707 ALDH1A2O94788 518 aa20.34■□□□□ 0.85
SREBF1-220ENST00000581707 NCAM1P13591 858 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms