RNA–Protein interactions for RNA: ENST00000580278.5

CCDC144NL-AS1-213, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 1,819 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-213ENST00000580278 FAM109BQ6ICB4 259 aaPredicted RBP17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 MAP7D3Q8IWC1 876 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 PQLC3Q8N755 202 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CASKIN2Q8WXE0 1202 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 RNF157Q96PX1 679 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 KCTD15Q96SI1 283 aaPredicted RBP17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 FAM118BQ9BPY3 351 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 TRIM51Q9BSJ1 452 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 HTATIP2Q9BUP3 242 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ARGLU1Q9NWB6 273 aaPredicted RBP17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ZNF446Q9NWS9 450 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 DDIT4Q9NX09 232 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 A0A1W2PQH9 124 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 GRXCR1A8MXD5 290 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 RTN3O95197 1032 aaPredicted RBP17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 F9P00740 461 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 MYOGP15173 224 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ATF2P15336 505 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ATP2A2P16615 1042 aaKnown RBP17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 AIF1P55008 147 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 RPL10AP62906 217 aaKnown RBP17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 MTMR3Q13615 1198 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 OASLQ15646 514 aaKnown RBP17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 BEND6Q5SZJ8 279 aaPredicted RBP17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 DUPD1Q68J44 220 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 PCDH19Q8TAB3 1148 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 SLC35B2Q8TB61 432 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ZBED2Q9BTP6 218 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 TTLL2Q9BWV7 592 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 SMOC2Q9H3U7 446 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 DHX35Q9H5Z1 703 aaKnown RBP17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 TMPRSS4Q9NRS4 437 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 COMMD8Q9NX08 183 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 GMIPQ9P107 970 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 FNIP2Q9P278 1114 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 STK39Q9UEW8 545 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 FBXW11Q9UKB1 542 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 NEU2Q9Y3R4 380 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CEP290O15078 2479 aa17.51■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 APOC4-APOC2K7ER74 178 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 IRAK2O43187 625 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 APOC2P02655 101 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CTSAP10619 480 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ECHS1P30084 290 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ADRA1BP35368 520 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CARSP49589 748 aaKnown RBP17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 SNX1Q13596 522 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 KRT81Q14533 505 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 SLC9A4Q6AI14 798 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 MSANTD2Q6P1R3 559 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 IFT20Q8IY31 132 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CCDC105Q8IYK2 499 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 PYROXD2Q8N2H3 581 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 NKD2Q969F2 451 aaPredicted RBP17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ERP44Q9BS26 406 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 RXFP1Q9HBX9 757 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 DNPEPQ9ULA0 475 aa17.5■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 SYNJ2BP-COX16A0A087WUM0 186 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CSPG5O95196 566 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ZDHHC11BP0C7U3 371 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 YWHAQP27348 245 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 TUFMP49411 452 aaKnown RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 SEMA3BQ13214 749 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ANKRD20A8PQ5CZ79 823 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 BTBD8Q5XKL5 378 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 GSPT2Q8IYD1 628 aaKnown RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 PLD5Q8N7P1 536 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 EIF1ADQ8N9N8 165 aaKnown RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 KLHL23Q8NBE8 558 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CASP10Q92851 521 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 FAM204AQ9H8W3 233 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 COX16Q9P0S2 106 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 RCOR3Q9P2K3 495 aaPredicted RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 SAE1Q9UBE0 346 aaPredicted RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 SLC38A8A6NNN8 435 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 PECAM1P16284 738 aaPredicted RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 DNAJB2P25686 324 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 DRG2P55039 364 aaKnown RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 DYNLT1P63172 113 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 OTUD4Q01804 1114 aaKnown RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 KRT17Q04695 432 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 TAF10Q12962 218 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 PPP6R3Q5H9R7 873 aaPredicted RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 RFX6Q8HWS3 928 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ARHGAP18Q8N392 663 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ATL2Q8NHH9 583 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ACTL9Q8TC94 416 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 AENQ8WTP8 325 aaKnown RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 HAUS1Q96CS2 278 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CSPG4P5Q96PW8 444 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 FRMD8P1Q9BZ68 369 aaPredicted RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 MRPL17Q9NRX2 175 aaKnown RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CLIC5Q9NZA1 410 aa17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 CWC15Q9P013 229 aaKnown RBP17.49■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 TEX28O15482 410 aa17.48■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 TLL1O43897 1013 aa17.48■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 SEC31AO94979 1220 aaKnown RBP17.48■□□□□ 0.39
CCDC144NL-AS1-213ENST00000580278 ECEL1O95672 775 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms