RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 DRAP1Q14919 205 aaPredicted RBP11.39□□□□□ -0.59
NDEL1-208ENST00000580237 GAB4Q2WGN9 574 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 C10orf76Q5T2E6 689 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 MAMSTRQ6ZN01 415 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 Q6ZNB5 142 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 PRR23BQ6ZRT6 265 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 BHLHA9Q7RTU4 235 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 ASCL5Q7RTU5 278 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 TMEM25Q86YD3 366 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 CLEC4CQ8WTT0 213 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 HHIPQ96QV1 700 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 WDR35Q9P2L0 1181 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 NCDNQ9UBB6 729 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 SFMBT1Q9UHJ3 866 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 AJAP1Q9UKB5 411 aaPredicted RBP11.39□□□□□ -0.59
NDEL1-208ENST00000580237 SMG5Q9UPR3 1016 aaKnown RBP11.39□□□□□ -0.59
NDEL1-208ENST00000580237 HBS1LQ9Y450 684 aaKnown RBP11.39□□□□□ -0.59
NDEL1-208ENST00000580237 TBC1D3BA6NDS4 549 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 E5RJQ4 531 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 CACNG3O60359 315 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 PAPSS2O95340 614 aaPredicted RBP11.38□□□□□ -0.59
NDEL1-208ENST00000580237 NCAM1P13591 858 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 UCHL3P15374 230 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 PTMSP20962 102 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 GPD2P43304 727 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 COPB1P53618 953 aaKnown RBP11.38□□□□□ -0.59
NDEL1-208ENST00000580237 SNX16P57768 344 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 DMC1Q14565 340 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 ANO6Q4KMQ2 910 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 KLHDC7AQ5VTJ3 777 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 MSANTD2Q6P1R3 559 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 CEP68Q76N32 757 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 SLC47A2Q86VL8 602 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 LONP2Q86WA8 852 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 SCUBE3Q8IX30 993 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 CCDC33Q8N5R6 958 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 TERB1Q8NA31 727 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 ZBTB44Q8NCP5 570 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 C1orf131Q8NDD1 294 aaKnown RBP11.38□□□□□ -0.59
NDEL1-208ENST00000580237 TSTD1Q8NFU3 115 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 STK32AQ8WU08 396 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 EZH1Q92800 747 aaPredicted RBP11.38□□□□□ -0.59
NDEL1-208ENST00000580237 SERPINB11Q96P15 392 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 FAM207AQ9NSI2 230 aaPredicted RBP11.38□□□□□ -0.59
NDEL1-208ENST00000580237 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 PLK2Q9NYY3 685 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 MARK1Q9P0L2 795 aa11.38□□□□□ -0.59
NDEL1-208ENST00000580237 ZFHX2Q9C0A1 2572 aaPredicted RBP11.37□□□□□ -0.59
NDEL1-208ENST00000580237 LGALS16A8MUM7 142 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 F8VZ95 297 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 K7ESF4 209 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 FOXN3O00409 490 aaPredicted RBP11.37□□□□□ -0.59
NDEL1-208ENST00000580237 GREM1O60565 184 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 KLF8O95600 359 aaPredicted RBP11.37□□□□□ -0.59
NDEL1-208ENST00000580237 APBB3O95704 486 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 KLKB1P03952 638 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 TDGF1P13385 188 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 TIE1P35590 1138 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 PXNP49023 591 aaPredicted RBP11.37□□□□□ -0.59
NDEL1-208ENST00000580237 DGKGP49619 791 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 TBX4P57082 545 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 MRPS21P82921 87 aaKnown RBP11.37□□□□□ -0.59
NDEL1-208ENST00000580237 DMWDQ09019 674 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 NUGGCQ68CJ6 796 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 SYT13Q7L8C5 426 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 TRMT11Q7Z4G4 463 aaKnown RBP11.37□□□□□ -0.59
NDEL1-208ENST00000580237 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.37□□□□□ -0.59
NDEL1-208ENST00000580237 ETFBKMTQ8IXQ9 262 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 FAM71AQ8IYT1 594 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 NEK11Q8NG66 645 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 USP33Q8TEY7 942 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 DDI1Q8WTU0 396 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 PPP1R13BQ96KQ4 1090 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 SPAG5Q96R06 1193 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 FAM204AQ9H8W3 233 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 GMEB2Q9UKD1 530 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 AGO1Q9UL18 857 aaKnown RBP11.37□□□□□ -0.59
NDEL1-208ENST00000580237 PCDHGC3Q9UN70 934 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 SDK1Q7Z5N4 2213 aa11.37□□□□□ -0.59
NDEL1-208ENST00000580237 OTOGLQ3ZCN5 2332 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 THADAQ6YHU6 1953 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 EP300Q09472 2414 aaPredicted RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 TYW5A2RUC4 315 aaKnown RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 K7EQS6 105 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 LILRB5O75023 590 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 APOEP02649 317 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 SLC11A2P49281 568 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 ZNF445P59923 1031 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 POLR2FP61218 127 aaKnown RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 UBXN1Q04323 297 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 KCNMA1Q12791 1236 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 SIM2Q14190 667 aaPredicted RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 SYCP1Q15431 976 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 TRIP4Q15650 581 aaPredicted RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 LPAL2Q16609 132 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 HSF5Q4G112 596 aaPredicted RBP11.36□□□□□ -0.59
NDEL1-208ENST00000580237 EOGTQ5NDL2 527 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 TAF3Q5VWG9 929 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 SMYD5Q6GMV2 418 aa11.36□□□□□ -0.59
NDEL1-208ENST00000580237 ANO7Q6IWH7 933 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms