RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 EFEMP1Q12805 493 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 NCAPHQ15003 741 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 PREPLQ4J6C6 727 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 LY6G5CQ5SRR4 150 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 NAIF1Q69YI7 327 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 DENND1BQ6P3S1 775 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 Q6ZS52 159 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 TMEM110Q86TL2 294 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 ANKRD20A12PQ8NF67 263 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 DDX1Q92499 740 aaKnown RBP14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 BPIFA3Q9BQP9 254 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 NAA15Q9BXJ9 866 aaKnown RBP14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 SLC4A5Q9BY07 1137 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 DCLK3Q9C098 648 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 LHX5Q9H2C1 402 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 ACP6Q9NPH0 428 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 MARK1Q9P0L2 795 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 LIMA1Q9UHB6 759 aaKnown RBP14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 RASAL2Q9UJF2 1139 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 AJAP1Q9UKB5 411 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 PCDHGC3Q9UN70 934 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 DAAM1Q9Y4D1 1078 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 WDR87Q6ZQQ6 2873 aa14.28□□□□□ -0.12
CSNK1D-208ENST00000578501 FOXD2O60548 495 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 KLKB1P03952 638 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 UCHL3P15374 230 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 ZNF18P17022 549 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 CLCN1P35523 988 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 SATB1Q01826 763 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 DRAP1Q14919 205 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 TRIP4Q15650 581 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 KLHL40Q2TBA0 621 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 LAIR1Q6GTX8 287 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 CAVIN1Q6NZI2 390 aaKnown RBP14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 MSANTD2Q6P1R3 559 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 BEND5Q7L4P6 421 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 TMEM25Q86YD3 366 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 ETFBKMTQ8IXQ9 262 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 RNF139Q8WU17 664 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 EZH1Q92800 747 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 PLD4Q96BZ4 506 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 PNKPQ96T60 521 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 VPS16Q9H269 839 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 WDR35Q9P2L0 1181 aa14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 HBS1LQ9Y450 684 aaKnown RBP14.27□□□□□ -0.13
CSNK1D-208ENST00000578501 SLC12A8A0AV02 714 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 K7EQS6 105 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 RNF40O75150 1001 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 LTFP02788 710 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 RETP07949 1114 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 PTMSP20962 102 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 CHKAP35790 457 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 GRIA2P42262 883 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 FKBP15Q5T1M5 1219 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 FMNL3Q8IVF7 1028 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 SCUBE3Q8IX30 993 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 GOLGA1Q92805 767 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 TRIM62Q9BVG3 475 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 LSM14BQ9BX40 385 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 STK33Q9BYT3 514 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 HSD3B7Q9H2F3 369 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 PARD6AQ9NPB6 346 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 ST7Q9NRC1 585 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 ANGPTL2Q9UKU9 493 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 FHOD1Q9Y613 1164 aa14.26□□□□□ -0.13
CSNK1D-208ENST00000578501 MAP1BP46821 2468 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 LGALS16A8MUM7 142 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 K7ESF4 209 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 PIK3R2O00459 728 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 CACNG3O60359 315 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 KAT7O95251 611 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 LATS1O95835 1130 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 APODP05090 189 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 CDK11BP21127 795 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 CORO1AP31146 461 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 KRT9P35527 623 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 TNFRSF4P43489 277 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 SLC6A11P48066 632 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 COPB1P53618 953 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 SPEM2Q0P670 501 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 PDCLQ13371 301 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 RAPGEF1Q13905 1077 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 ANO4Q32M45 955 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 ANO6Q4KMQ2 910 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 TSSK4Q6SA08 328 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 SLC47A2Q86VL8 602 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 C12orf40Q86WS4 652 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 FAM217AQ8IXS0 508 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 PHTF2Q8N3S3 785 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 CPXM2Q8N436 756 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 WDTC1Q8N5D0 677 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 KCNV2Q8TDN2 545 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 CLEC4CQ8WTT0 213 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 EDEM1Q92611 657 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 MIS12Q9H081 205 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 DEC1Q9P2X7 70 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 CYTH4Q9UIA0 394 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 AGO1Q9UL18 857 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 ZFHX4Q86UP3 3567 aa14.25□□□□□ -0.13
CSNK1D-208ENST00000578501 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms