RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 PM20D1Q6GTS8 502 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 VSTM1Q6UX27 236 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.63■□□□□ 0.412e-15■■■□□ 16.7
SREBF1-218ENST00000578469 GPRIN1Q7Z2K8 1008 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 MREGQ8N565 214 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 CCDC89Q8N998 374 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 BBOF1Q8ND07 529 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 NKD2Q969F2 451 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-218ENST00000578469 NT5C3BQ969T7 300 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 RNF157Q96PX1 679 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 TGS1Q96RS0 853 aaKnown RBP17.63■□□□□ 0.41
SREBF1-218ENST00000578469 RAD9AQ99638 391 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 RHOBTB2Q9BYZ6 727 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 PCDH18Q9HCL0 1135 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 MARCH5Q9NX47 278 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 LCHNA4D1U4 455 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 YJEFN3A6XGL0 299 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 E7ENQ6 273 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 APOC4-APOC2K7ER74 178 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 M0QYT0 321 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 NDC80O14777 642 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 TRIM66O15016 1216 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 F9P00740 461 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 APOC2P02655 101 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 CD48P09326 243 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 ATF2P15336 505 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 TFE3P19532 575 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-218ENST00000578469 ITIH2P19823 946 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 RPL21P46778 160 aaKnown RBP17.62■□□□□ 0.41
SREBF1-218ENST00000578469 ALDH7A1P49419 539 aaKnown RBP17.62■□□□□ 0.41
SREBF1-218ENST00000578469 ADCY2Q08462 1091 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 SMARCB1Q12824 385 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 RAB6CQ53S08 254 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 ALS2CLQ60I27 953 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 ANKS3Q6ZW76 656 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 FAM71BQ8TC56 605 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 FMO2Q99518 471 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 ZNF670Q9BS34 389 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 GPR62Q9BZJ7 368 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 RAB6CQ9H0N0 254 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 UBE2ZQ9H832 354 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-218ENST00000578469 PRDM16Q9HAZ2 1276 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 TMEM30AQ9NV96 361 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 GPATCH2LQ9NWQ4 482 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 ABI2Q9NYB9 513 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-218ENST00000578469 WHRNQ9P202 907 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 DNPEPQ9ULA0 475 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 HPCAL4Q9UM19 191 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 AP4E1Q9UPM8 1137 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 USP3Q9Y6I4 520 aa17.62■□□□□ 0.41
SREBF1-218ENST00000578469 MUC6Q6W4X9 2439 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 CARNS1A5YM72 827 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 MCF2LO15068 1137 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 DGKIO75912 1065 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 GJB5O95377 273 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 KRT14P02533 472 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 ITGAVP06756 1048 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 OR4Q2P0C623 313 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 FAM153BP0C7A2 387 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 NCAM1P13591 858 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 ZFXP17010 805 aaPredicted RBP17.61■□□□□ 0.41
SREBF1-218ENST00000578469 CYP2F1P24903 491 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 ECHS1P30084 290 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 HSPA9P38646 679 aaKnown RBP17.61■□□□□ 0.41
SREBF1-218ENST00000578469 MAGEA11P43364 429 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 AIF1P55008 147 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 PLTPP55058 493 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 DEFB103AP81534 67 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 OTUD4Q01804 1114 aaKnown RBP17.61■□□□□ 0.41
SREBF1-218ENST00000578469 CAV1Q03135 178 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 MTMR3Q13615 1198 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 DPYSL2Q16555 572 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 FAM153CQ494X1 144 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 HSP90B2PQ58FF3 399 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 ZC3H12AQ5D1E8 599 aaKnown RBP17.61■□□□□ 0.41
SREBF1-218ENST00000578469 HFE2Q6ZVN8 426 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 BEND5Q7L4P6 421 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 SCN4BQ8IWT1 228 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 SLC35B2Q8TB61 432 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 SLC7A14Q8TBB6 771 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 ACTL9Q8TC94 416 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 HAUS1Q96CS2 278 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 SNF8Q96H20 258 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 C8orf48Q96LL4 319 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 FAM118BQ9BPY3 351 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 DHX35Q9H5Z1 703 aaKnown RBP17.61■□□□□ 0.41
SREBF1-218ENST00000578469 FAM153AQ9UHL3 310 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 NAALADL1Q9UQQ1 740 aa17.61■□□□□ 0.41
SREBF1-218ENST00000578469 PTPRSQ13332 1948 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 FAM86C2PA6NEL3 165 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 APOL1O14791 398 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 TGM2P21980 687 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 ADCY8P40145 1251 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 ARL4AP40617 200 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 ERVK-21P61565 698 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 MMRN1Q13201 1228 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 ANKRD20A8PQ5CZ79 823 aa17.6■□□□□ 0.41
SREBF1-218ENST00000578469 PPP6R3Q5H9R7 873 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-218ENST00000578469 CFAP58Q5T655 872 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms