RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 VPS36Q86VN1 386 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 ABRAQ8N0Z2 381 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 IL17DQ8TAD2 202 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 SEPT1Q8WYJ6 367 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 GOLGA1Q92805 767 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 FAM167AQ96KS9 214 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 CEP170P1Q96L14 293 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 FAM81BQ96LP2 452 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 SPAG5Q96R06 1193 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 CRACR2AQ9BSW2 395 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 CARD6Q9BX69 1037 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 C12orf65Q9H3J6 166 aaKnown RBP5.22□□□□□ -1.57
IFT20-205ENST00000578009 TAF1DQ9H5J8 278 aaPredicted RBP5.22□□□□□ -1.57
IFT20-205ENST00000578009 DHX33Q9H6R0 707 aaKnown RBP5.22□□□□□ -1.57
IFT20-205ENST00000578009 NLRC4Q9NPP4 1024 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 KMT5AQ9NQR1 393 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 ARGLU1Q9NWB6 273 aaPredicted RBP5.22□□□□□ -1.57
IFT20-205ENST00000578009 ARHGAP28Q9P2N2 729 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 PPARGC1AQ9UBK2 798 aaKnown RBP5.22□□□□□ -1.57
IFT20-205ENST00000578009 NENFQ9UMX5 172 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.22□□□□□ -1.57
IFT20-205ENST00000578009 COQ4Q9Y3A0 265 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 SAR1BQ9Y6B6 198 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 STYXL1Q9Y6J8 313 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 PARP14Q460N5 1801 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 SBF1O95248 1867 aa5.22□□□□□ -1.57
IFT20-205ENST00000578009 RBBP6Q7Z6E9 1792 aaKnown RBP5.21□□□□□ -1.57
IFT20-205ENST00000578009 A0A0U1RQJ8 604 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 GSTTP1A0A1W2PQM5 241 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CTAGE15A4D2H0 777 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 ASB14A6NK59 587 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CES2O00748 559 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 SLC16A4O15374 487 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 STRNO43815 780 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 SUSD5O60279 629 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 ADH4P08319 380 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 PLEKP08567 350 aaPredicted RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 CTAGE8P0CG41 777 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CETPP11597 493 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 COL6A2P12110 1019 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 TCP1P17987 556 aaKnown RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 CNGA1P29973 690 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 SOX5P35711 763 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 ARL2P36404 184 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 NAMPTP43490 491 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 GJA8P48165 433 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 GCLCP48506 637 aaPredicted RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 CYP2J2P51589 502 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 EFNA5P52803 228 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 PEX3P56589 373 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CCNA1P78396 465 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 SP2Q02086 613 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 PRKCEQ02156 737 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CNTN2Q02246 1040 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CKAP4Q07065 602 aaKnown RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 TUBA3CQ13748 450 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 RAPGEF1Q13905 1077 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 PRKG1Q13976 671 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 KCTD2Q14681 263 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 KIF22Q14807 665 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 BRD3Q15059 726 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 ERCC6LQ2NKX8 1250 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 EPC2Q52LR7 807 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 TDRD12Q587J7 1177 aaKnown RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 DCAF17Q5H9S7 520 aaPredicted RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 FAM102BQ5T8I3 360 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 UTP14CQ5TAP6 766 aaKnown RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 SLFN12LQ6IEE8 588 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CCDC62Q6P9F0 684 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 TUBA3EQ6PEY2 450 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 PLPPR4Q7Z2D5 763 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CTAGE6Q86UF2 777 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CCDC60Q8IWA6 550 aaPredicted RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 CTAGE4Q8IX94 777 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 MSL3Q8N5Y2 521 aaKnown RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 MSANTD4Q8NCY6 345 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 SLC30A5Q8TAD4 765 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 LMO3Q8TAP4 145 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 PARD3BQ8TEW8 1205 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 LMBR1Q8WVP7 490 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 HNRNPLLQ8WVV9 542 aaKnown RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 ATRIPQ8WXE1 791 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 RUBCNQ92622 972 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 C1orf159Q96HA4 380 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 SEC16BQ96JE7 1060 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 ALS2CR12Q96Q35 445 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 JPH2Q9BR39 696 aaPredicted RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 SYT11Q9BT88 431 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 CCDC94Q9BW85 323 aaPredicted RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 INTS2Q9H0H0 1204 aaKnown RBP5.21□□□□□ -1.58
IFT20-205ENST00000578009 PORCNQ9H237 461 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 ATP6V0A4Q9HBG4 840 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 POLD4Q9HCU8 107 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 XPNPEP1Q9NQW7 623 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 ZNF302Q9NR11 478 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 GCNT4Q9P109 453 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 MORF4L1Q9UBU8 362 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 SNX12Q9UMY4 172 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 FZD1Q9UP38 647 aa5.21□□□□□ -1.58
IFT20-205ENST00000578009 NPFFR2Q9Y5X5 522 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms