RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 GBP6Q6ZN66 633 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 TOGARAM2Q6ZUX3 1019 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 ETFBKMTQ8IXQ9 262 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 PHTF2Q8N3S3 785 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 CAMKK1Q8N5S9 505 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 GPR161Q8N6U8 529 aaKnown RBP11.12□□□□□ -0.63
LITAF-216ENST00000574848 EHBP1Q8NDI1 1231 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 SYN2Q92777 582 aaPredicted RBP11.12□□□□□ -0.63
LITAF-216ENST00000574848 TATDN2Q93075 761 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 KLF16Q9BXK1 252 aaPredicted RBP11.12□□□□□ -0.63
LITAF-216ENST00000574848 PLCB1Q9NQ66 1216 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 FAM207AQ9NSI2 230 aaPredicted RBP11.12□□□□□ -0.63
LITAF-216ENST00000574848 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
LITAF-216ENST00000574848 OSER1Q9NX31 292 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 CLIC5Q9NZA1 410 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 NCDNQ9UBB6 729 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 MYO1AQ9UBC5 1043 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 ADGRG1Q9Y653 693 aa11.12□□□□□ -0.63
LITAF-216ENST00000574848 CACNA1AO00555 2505 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 UQCRHLA0A096LP55 91 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 A0A0A0MRY4 1105 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.11□□□□□ -0.63
LITAF-216ENST00000574848 K7EQS6 105 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 HRO43593 1189 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 LRP3O75074 770 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 NDUFA10O95299 355 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 UQCRHP07919 91 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 ADH5P11766 374 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 TGM1P22735 817 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 ATP5C1P36542 298 aaKnown RBP11.11□□□□□ -0.63
LITAF-216ENST00000574848 YWHAEP62258 255 aaKnown RBP11.11□□□□□ -0.63
LITAF-216ENST00000574848 SPA17Q15506 151 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 HSF5Q4G112 596 aaPredicted RBP11.11□□□□□ -0.63
LITAF-216ENST00000574848 ZNF394Q53GI3 561 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 RAD9BQ6WBX8 426 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 HTR3DQ70Z44 454 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 SCD5Q86SK9 330 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 C12orf40Q86WS4 652 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 BBS7Q8IWZ6 715 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 DCLK2Q8N568 766 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 ANKRD52Q8NB46 1076 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 TTC16Q8NEE8 873 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 RPLP0P6Q8NHW5 317 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 LMO3Q8TAP4 145 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 USP33Q8TEY7 942 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 SECISBP2LQ93073 1101 aaKnown RBP11.11□□□□□ -0.63
LITAF-216ENST00000574848 CCDC42Q96M95 316 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 HEXIM2Q96MH2 286 aaKnown RBP11.11□□□□□ -0.63
LITAF-216ENST00000574848 LSM14BQ9BX40 385 aaKnown RBP11.11□□□□□ -0.63
LITAF-216ENST00000574848 TSGA10Q9BZW7 698 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 DEF6Q9H4E7 631 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 NMUR1Q9HB89 426 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 EBF1Q9UH73 591 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 GMEB2Q9UKD1 530 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 MYO6Q9UM54 1294 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 SLC8A2Q9UPR5 921 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 SH3BP1Q9Y3L3 701 aa11.11□□□□□ -0.63
LITAF-216ENST00000574848 EPN1Q9Y6I3 576 aaPredicted RBP11.11□□□□□ -0.63
LITAF-216ENST00000574848 A0A1W2PQH9 124 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 EIF3CLB5ME19 914 aaKnown RBP11.1□□□□□ -0.63
LITAF-216ENST00000574848 DYNC1I1O14576 645 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 XPO1O14980 1071 aaKnown RBP11.1□□□□□ -0.63
LITAF-216ENST00000574848 KRT86O43790 486 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 RETP07949 1114 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 HOXC13P31276 330 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 CASQ1P31415 396 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 BCAT1P54687 386 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 MRPS21P82921 87 aaKnown RBP11.1□□□□□ -0.63
LITAF-216ENST00000574848 GAD2Q05329 585 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 TUBB2AQ13885 445 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 SIM2Q14190 667 aaPredicted RBP11.1□□□□□ -0.63
LITAF-216ENST00000574848 DMC1Q14565 340 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 EXOC3L4Q17RC7 722 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 LY6G5CQ5SRR4 150 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 SFMBT2Q5VUG0 894 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 Q6ZNB5 142 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 BHLHA9Q7RTU4 235 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 TADA2BQ86TJ2 420 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 PIGZQ86VD9 579 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 TTC30AQ86WT1 665 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 REXO1L1PQ8IX06 675 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 GAB3Q8WWW8 586 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 WBP2Q969T9 261 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 JAKMIP2Q96AA8 810 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 CDK5RAP1Q96SZ6 601 aaKnown RBP11.1□□□□□ -0.63
LITAF-216ENST00000574848 PNKPQ96T60 521 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 EIF3CQ99613 913 aaKnown RBP11.1□□□□□ -0.63
LITAF-216ENST00000574848 HINFPQ9BQA5 517 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 TUBB2BQ9BVA1 445 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 NACA2Q9H009 215 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 HAUS4Q9H6D7 363 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 SPHK2Q9NRA0 654 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 RAB23Q9ULC3 237 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 MMP17Q9ULZ9 603 aa11.1□□□□□ -0.63
LITAF-216ENST00000574848 PLXND1Q9Y4D7 1925 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 CEP250Q9BV73 2442 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 MYOFQ9NZM1 2061 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 SSU72P8A0A1W2PR75 194 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 O00370 1275 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms