RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
NUP88-207ENST00000573584 MINDY3Q9H8M7 445 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 FAM159BA6NKW6 160 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 METTL18O95568 372 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 BAG2O95816 211 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 TGFB3P10600 412 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 P4HA1P13674 534 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 RGS7P49802 495 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 WASHC5Q12768 1159 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 CA9Q16790 459 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 HSDL1Q3SXM5 330 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 SLC9A4Q6AI14 798 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 MYLK4Q86YV6 388 aaPredicted RBP16.18■□□□□ 0.18
NUP88-207ENST00000573584 EXOC8Q8IYI6 725 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 ADGRF2Q8IZF7 708 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 PHC3Q8NDX5 983 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 FAM172AQ8WUF8 416 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 DEPDC1BQ8WUY9 529 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 TSPAN16Q9UKR8 245 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 TNFSF13BQ9Y275 285 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 SOWAHBA6NEL2 793 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 STAG3L1P0CL83 205 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 CYP3A5P20815 502 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 NDST1P52848 882 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 ARCQ7LC44 396 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 IFT43Q96FT9 208 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 HPDLQ96IR7 371 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 MIS12Q9H081 205 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 NDE1Q9NXR1 346 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 NOP56O00567 594 aaKnown RBP16.18■□□□□ 0.18
NUP88-207ENST00000573584 ATP5BP06576 529 aaKnown RBP16.18■□□□□ 0.18
NUP88-207ENST00000573584 IQCF3P0C7M6 154 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 ATICP31939 592 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 MAGEA3P43357 314 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 SERPINB9P50453 376 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 IZUMO2Q6UXV1 221 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 ZNF534Q76KX8 674 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 CXorf38Q8TB03 319 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 APOL6Q9BWW8 343 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 C1orf21Q9H246 121 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 XAB2Q9HCS7 855 aaKnown RBP16.18■□□□□ 0.18
NUP88-207ENST00000573584 STK32BQ9NY57 414 aa16.18■□□□□ 0.18
NUP88-207ENST00000573584 BARX2Q9UMQ3 279 aaPredicted RBP16.18■□□□□ 0.18
NUP88-207ENST00000573584 SDR42E2A6NKP2 422 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 EDNRBP24530 442 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 MBTD1Q05BQ5 628 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 GSTA3Q16772 222 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 FASTKD1Q53R41 847 aaKnown RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 LCLAT1Q6UWP7 414 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 WDR75Q8IWA0 830 aaKnown RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 SLC25A41Q8N5S1 370 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 C12orf29Q8N999 325 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 SNRNP25Q9BV90 132 aaKnown RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 LCTP09848 1927 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 CSDE1O75534 798 aaKnown RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 UBTFL6P0CB48 400 aaPredicted RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 SDC4P31431 198 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 GRIA1P42261 906 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 GMPSP49915 693 aaPredicted RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 CLCN3P51790 818 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 DSG1Q02413 1049 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 C11orf91Q3C1V1 193 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 CDKL3Q8IVW4 592 aaPredicted RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 GPR20Q99678 358 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 GBA2Q9HCG7 927 aaPredicted RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 DDX43Q9NXZ2 648 aaKnown RBP16.17■□□□□ 0.18
NUP88-207ENST00000573584 SOX13Q9UN79 622 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 PCDHA11Q9Y5I1 949 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 DOCK1Q14185 1865 aa16.17■□□□□ 0.18
NUP88-207ENST00000573584 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.16■□□□□ 0.18
NUP88-207ENST00000573584 C6orf222P0C671 652 aaPredicted RBP16.16■□□□□ 0.18
NUP88-207ENST00000573584 AOC1P19801 751 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 RPS12P25398 132 aaKnown RBP16.16■□□□□ 0.18
NUP88-207ENST00000573584 EFCAB12Q6NXP0 572 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 C4orf22Q6V702 233 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 CCDC33Q8N5R6 958 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 NR1H4Q96RI1 486 aaPredicted RBP16.16■□□□□ 0.18
NUP88-207ENST00000573584 NRDE2Q9H7Z3 1164 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 VRTNQ9H8Y1 702 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 DNAJB4Q9UDY4 337 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 PPM1HQ9ULR3 514 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 MEI4A8MW99 385 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 ARIH2O95376 493 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 PFKMP08237 780 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 FOXB2Q5VYV0 432 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 C16orf46Q6P387 395 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 KYAT3Q6YP21 454 aaKnown RBP16.16■□□□□ 0.18
NUP88-207ENST00000573584 TIFABQ6ZNK6 161 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 PIWIL2Q8TC59 973 aaKnown RBP16.16■□□□□ 0.18
NUP88-207ENST00000573584 TBCBQ99426 244 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 MMP19Q99542 508 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 ZNF670Q9BS34 389 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 SORCS3Q9UPU3 1222 aa16.16■□□□□ 0.18
NUP88-207ENST00000573584 GCATO75600 419 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 LYPLA1O75608 230 aaPredicted RBP16.15■□□□□ 0.18
NUP88-207ENST00000573584 CYP2F1P24903 491 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 CPOXP36551 454 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 GBE1Q04446 702 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 PMF1Q6P1K2 205 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms