RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 RAB41Q5JT25 222 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 PMS2CLQ68D20 193 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 SDE2Q6IQ49 451 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 TTI2Q6NXR4 508 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 CYP2U1Q7Z449 544 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 RASSF3Q86WH2 238 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 CREBRFQ8IUR6 639 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 ELOA2Q8IYF1 753 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 CHPFQ8IZ52 775 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 PHTF2Q8N3S3 785 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 UBA3Q8TBC4 463 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 RNF139Q8WU17 664 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 UBXN6Q9BZV1 441 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 VPS45Q9NRW7 570 aa10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 OLA1Q9NTK5 396 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-212ENST00000573328 SPTBN2O15020 2390 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 CKAP5Q14008 2032 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 A0A0A0MRY4 1105 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 PIK3R2O00459 728 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 GREM1O60565 184 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 ADAM23O75077 832 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 FGFR1OPO95684 399 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 CAVIN2O95810 425 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 GNA14O95837 355 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 HNRNPLP14866 589 aaKnown RBP eCLIP10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 NTSR1P30989 418 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 CHKAP35790 457 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 RGS7P49802 495 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 BYSLQ13895 437 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 MORC3Q14149 939 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 EGFLAMQ63HQ2 1017 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 TCEAL6Q6IPX3 200 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 Q6ZNB5 142 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 TOGARAM2Q6ZUX3 1019 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 ARMCX6Q7L4S7 300 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 RRAGAQ7L523 313 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 DENND1CQ8IV53 801 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 FMNL3Q8IVF7 1028 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 ZNF276Q8N554 614 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 RBBP8NLQ8NC74 664 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 RLN3Q8WXF3 142 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 NDRG1Q92597 394 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 EDEM1Q92611 657 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 GOLGA1Q92805 767 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 TCEAL3Q969E4 200 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 PLD4Q96BZ4 506 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 EDEM2Q9BV94 578 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 SRRTQ9BXP5 876 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 MARK1Q9P0L2 795 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 KIAA1257Q9ULG3 409 aa10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.11□□□□□ -0.79
NPLOC4-212ENST00000573328 NYNRINQ9P2P1 1898 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 BCLAF3A2AJT9 711 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 O00370 1275 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 P4HA2O15460 535 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 AFPP02771 609 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 PAEPP09466 180 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 KRT5P13647 590 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 BMP6P22004 513 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 BRD2P25440 801 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 HARS2P49590 506 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 KCNH2Q12809 1159 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 STILQ15468 1287 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 CAMK4Q16566 473 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 PPM1JQ5JR12 505 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 PLA2G2CQ5R387 149 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 RNF43Q68DV7 783 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 LPCAT2Q7L5N7 544 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 ARHGEF19Q8IW93 802 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 UBR7Q8N806 425 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 KCNV2Q8TDN2 545 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 DDI1Q8WTU0 396 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 PIGKQ92643 395 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 KAT5Q92993 513 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 CNGB3Q9NQW8 809 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 CACNA2D2Q9NY47 1150 aa10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 AGO1Q9UL18 857 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-212ENST00000573328 ATXN2Q99700 1313 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 GON4LQ3T8J9 2241 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 YJEFN3A6XGL0 299 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 PRRT4C9JH25 899 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 E7ENQ6 273 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 PMM2O15305 246 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 CALCAP01258 141 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 KLKB1P03952 638 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 GABRG2P18507 467 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 P2RY2P41231 377 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 DAOAP59103 153 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 UBE2HP62256 183 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 GCNT1Q02742 428 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 RPL6Q02878 288 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 ARID5AQ03989 594 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 STARD3Q14849 445 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 TPD52L1Q16890 204 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 STPG1Q5TH74 334 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 BSPRYQ5W0U4 402 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 PM20D1Q6GTS8 502 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 FOXR2Q6PJQ5 311 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms