RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 MTF1Q14872 753 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 C10orf76Q5T2E6 689 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 VITQ6UXI7 678 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 MFSD6LQ8IWD5 586 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 EMC1Q8N766 993 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 ADAM32Q8TC27 787 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 RXFP2Q8WXD0 754 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 KHSRPQ92945 711 aaKnown RBP eCLIP15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 RNF34Q969K3 372 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 MCEEQ96PE7 176 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 RPP25Q9BUL9 199 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 TRMT61BQ9BVS5 477 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 SMOC2Q9H3U7 446 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 COX16Q9P0S2 106 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 TMEM59LQ9UK28 342 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 HBS1LQ9Y450 684 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 EPN1Q9Y6I3 576 aaPredicted RBP15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 TICRRQ7Z2Z1 1910 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 COL6A3P12111 3177 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 M0QYT0 321 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 MSI1O43347 362 aaKnown RBP15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 PDGFRAP16234 1089 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 GPD1P21695 349 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 FECHP22830 423 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 GDI1P31150 447 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 FLT3P36888 993 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 IFNAR2P48551 515 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 USP4Q13107 963 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 NME3Q13232 169 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 TDGQ13569 410 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 ZNF77Q15935 545 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 ARHGAP29Q52LW3 1261 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 PLEKHA7Q6IQ23 1121 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 SND1Q7KZF4 910 aaKnown RBP eCLIP15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 ARCQ7LC44 396 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 TAC4Q86UU9 113 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 RNF135Q8IUD6 432 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 CCDC112Q8NEF3 446 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 JOSD2Q8TAC2 188 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 PLD4Q96BZ4 506 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 RSPRY1Q96DX4 576 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 NECAB3Q96P71 396 aaPredicted RBP15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 UHRF1Q96T88 793 aaPredicted RBP15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 DDX23Q9BUQ8 820 aaKnown RBP15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 PLA2G2FQ9BZM2 168 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 DCLK3Q9C098 648 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 THAP2Q9H0W7 228 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 BRD9Q9H8M2 597 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 DDIT4Q9NX09 232 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 NENFQ9UMX5 172 aa15.13■□□□□ 0.01
NPLOC4-209ENST00000572760 C5orf42Q9H799 3197 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 E2F8A0AVK6 867 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 EIF3CLB5ME19 914 aaKnown RBP15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 SLC9A3R1O14745 358 aaPredicted RBP15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 ZNF263O14978 683 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 NDUFA10O95299 355 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 TCF3P15923 654 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 RFC1P35251 1148 aaPredicted RBP15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 HARS2P49590 506 aaKnown RBP15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 DEUP1Q05D60 604 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 MAMLD1Q13495 774 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 TRIP4Q15650 581 aaPredicted RBP15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 CDO1Q16878 200 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 SLC25A52Q3SY17 297 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 LRRC8AQ8IWT6 810 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 SLC44A3Q8N4M1 653 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 CFAP57Q96MR6 1250 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 EIF3CQ99613 913 aaKnown RBP15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 CTTNBP2NLQ9P2B4 639 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 TBC1D14Q9P2M4 693 aa15.12■□□□□ 0.01
NPLOC4-209ENST00000572760 TCRBV5S1A1TA0A578 114 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 C2CD4BA6NLJ0 364 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 SCAMP3O14828 347 aaKnown RBP15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 IRAK2O43187 625 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 STC2O76061 302 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 F9P00740 461 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 APOEP02649 317 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 TMEM253P0C7T8 217 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 CORO1AP31146 461 aaKnown RBP15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 RPL7AP62424 266 aaKnown RBP15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 PITX1P78337 314 aaPredicted RBP15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 ZXDBP98169 803 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 ATP11AP98196 1134 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 NNTQ13423 1086 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 NUGGCQ68CJ6 796 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 RAD9BQ6WBX8 426 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 UNC45BQ8IWX7 931 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 IRF7Q92985 503 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 ZFRQ96KR1 1074 aaKnown RBP15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 LRRC3BQ96PB8 259 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 TBCBQ99426 244 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 NPY6RQ99463 290 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 NUP85Q9BW27 656 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 PACSIN1Q9BY11 444 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 TMEM51Q9NW97 253 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 DUS2Q9NX74 493 aaKnown RBP15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 SLC12A6Q9UHW9 1150 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 INTUQ9ULD6 942 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 SORCS3Q9UPU3 1222 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 TLR6Q9Y2C9 796 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms