RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 UBE4BO95155 1302 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 A0A1W2PQH9 124 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 NDST1P52848 882 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 MFAP3P55082 362 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 GEN1Q17RS7 908 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 C10orf120Q5SQS8 335 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 TMPRSS6Q8IU80 811 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 RHBDD1Q8TEB9 315 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 SIPA1Q96FS4 1042 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 CRELD1Q96HD1 420 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCDC40-206ENST00000572083 FBXO10Q9UK96 956 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 SCML2Q9UQR0 700 aa20.91■□□□□ 0.94
CCDC40-206ENST00000572083 EIF4E1BA6NMX2 242 aaKnown RBP20.9■□□□□ 0.94
CCDC40-206ENST00000572083 LRRIQ3A6PVS8 624 aaPredicted RBP20.9■□□□□ 0.94
CCDC40-206ENST00000572083 EXOC3O60645 756 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 ZIC2O95409 532 aaPredicted RBP20.9■□□□□ 0.94
CCDC40-206ENST00000572083 VNN1O95497 513 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 FAM200BP0CF97 657 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 RARGP13631 454 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 PDCP20941 246 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 ACO1P21399 889 aaKnown RBP20.9■□□□□ 0.94
CCDC40-206ENST00000572083 IL27RAQ6UWB1 636 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 CLEC20AQ6ZU45 233 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 SNX19Q92543 992 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 PRCCQ92733 491 aaPredicted RBP20.9■□□□□ 0.94
CCDC40-206ENST00000572083 THAP10Q9P2Z0 257 aaPredicted RBP20.9■□□□□ 0.94
CCDC40-206ENST00000572083 DNMT3LQ9UJW3 386 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 BTBD3Q9Y2F9 522 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 SLCO1B1Q9Y6L6 691 aa20.9■□□□□ 0.94
CCDC40-206ENST00000572083 A0A1B0GVT2 93 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 METTL12A8MUP2 240 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 HHLA1C9JL84 531 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 FLRT2O43155 660 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 SYNCRIPO60506 623 aaKnown RBP20.89■□□□□ 0.93
CCDC40-206ENST00000572083 STC2O76061 302 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 ACADMP11310 421 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 OXTRP30559 389 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 PLA2G4AP47712 749 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 COPAP53621 1224 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 SNRPFP62306 86 aaKnown RBP20.89■□□□□ 0.93
CCDC40-206ENST00000572083 CYP4F3Q08477 520 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 FYB2Q5VWT5 728 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 FAM124AQ86V42 546 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 DHX58Q96C10 678 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 CDC6Q99741 560 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 DKK4Q9UBT3 224 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 NAGPAQ9UK23 515 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 SLC27A6Q9Y2P4 619 aa20.89■□□□□ 0.93
CCDC40-206ENST00000572083 MORC2Q9Y6X9 1032 aaPredicted RBP20.89■□□□□ 0.93
CCDC40-206ENST00000572083 FAM149AA5PLN7 773 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 DKK1O94907 266 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 PENKP01210 267 aaPredicted RBP20.88■□□□□ 0.93
CCDC40-206ENST00000572083 C4BPAP04003 597 aaKnown RBP20.88■□□□□ 0.93
CCDC40-206ENST00000572083 SYT1P21579 422 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 CASP1P29466 404 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 CSNK1EP49674 416 aaKnown RBP20.88■□□□□ 0.93
CCDC40-206ENST00000572083 AMPD3Q01432 767 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 ENPP2Q13822 863 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 ZNF234Q14588 700 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 BMT2Q1RMZ1 405 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 ERICH6BQ5W0A0 696 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 KLHDC10Q6PID8 442 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 C12orf56Q8IXR9 622 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 CRYBG2Q8N1P7 616 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 C1orf216Q8TAB5 229 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 PARD3BQ8TEW8 1205 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 CUEDC2Q9H467 287 aa20.88■□□□□ 0.93
CCDC40-206ENST00000572083 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.88■□□□□ 0.93
CCDC40-206ENST00000572083 CKAP5Q14008 2032 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 TRABD2BA6NFA1 517 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 NPC1O15118 1278 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 KLKB1P03952 638 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 P4HA1P13674 534 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 PRKCHP24723 683 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 ZNF132P52740 706 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 EHHADHQ08426 723 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 CCDC157Q569K6 752 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 SPOPLQ6IQ16 392 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 DBX2Q6ZNG2 339 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 ANKS1BQ7Z6G8 1248 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 UCMAQ8WVF2 138 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 NUP58Q9BVL2 599 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 SLC39A2Q9NP94 309 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 TFIP11Q9UBB9 837 aaKnown RBP20.87■□□□□ 0.93
CCDC40-206ENST00000572083 PCDHGB2Q9Y5G2 931 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 PCDHA5Q9Y5H7 936 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 TMEM131Q92545 1883 aa20.87■□□□□ 0.93
CCDC40-206ENST00000572083 IGLV3-19P01714 112 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 EPHX1P07099 455 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 HMBSP08397 361 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 AP3M2P53677 418 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 CUL4AQ13619 759 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 STK38Q15208 465 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 CNNM4Q6P4Q7 775 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 UNC13DQ70J99 1090 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 GALNT15Q8N3T1 639 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 SORCS1Q8WY21 1168 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 PIWIL1Q96J94 861 aaKnown RBP20.86■□□□□ 0.93
CCDC40-206ENST00000572083 TWNKQ96RR1 684 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms