RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 NAMPTP43490 491 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 C21orf59P57076 290 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 NLRP5P59047 1200 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 ASIC1P78348 528 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 GAD2Q05329 585 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 SFMBT2Q5VUG0 894 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 BTBD8Q5XKL5 378 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 MOXD1Q6UVY6 613 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 RSRC2Q7L4I2 434 aaKnown RBP7.39□□□□□ -1.23
CHD3-213ENST00000571249 CLEC14AQ86T13 490 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 TMPRSS6Q8IU80 811 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 TERB1Q8NA31 727 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 CCDC148Q8NFR7 591 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 TCTN2Q96GX1 697 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 SENP8Q96LD8 212 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 SLC6A18Q96N87 628 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 EIF2AK1Q9BQI3 630 aaKnown RBP7.39□□□□□ -1.23
CHD3-213ENST00000571249 TRIM9Q9C026 710 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 TMEM245Q9H330 911 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 CAAP1Q9H8G2 361 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 KCNMB3Q9NPA1 279 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 CUEDC1Q9NWM3 386 aaPredicted RBP7.39□□□□□ -1.23
CHD3-213ENST00000571249 VPS54Q9P1Q0 977 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 PCDHB6Q9Y5E3 794 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 A0A1B0GVM2 712 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 PPEF2O14830 753 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 VILLO15195 856 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 CASC3O15234 703 aaKnown RBP7.38□□□□□ -1.23
CHD3-213ENST00000571249 PRPF3O43395 683 aaKnown RBP7.38□□□□□ -1.23
CHD3-213ENST00000571249 TSPAN3O60637 253 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 SDC3O75056 442 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 VPS4BO75351 444 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 DDAH2O95865 285 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 ODC1P11926 461 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 CD27P26842 260 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 GUCY2FP51841 1108 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 SMARCB1Q12824 385 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 BECN1Q14457 450 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 TESK1Q15569 626 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 EIF2S3LQ2VIR3 472 aaKnown RBP7.38□□□□□ -1.23
CHD3-213ENST00000571249 SLC10A6Q3KNW5 377 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 SEZ6Q53EL9 994 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 DHX32Q7L7V1 743 aaKnown RBP7.38□□□□□ -1.23
CHD3-213ENST00000571249 TMC6Q7Z403 805 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 FSIP1Q8NA03 581 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 MCPH1Q8NEM0 835 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 HAS1Q92839 578 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 SNX21Q969T3 373 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 SIPA1Q96FS4 1042 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 P2RY11Q96G91 374 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 TRMT2BQ96GJ1 504 aaKnown RBP7.38□□□□□ -1.23
CHD3-213ENST00000571249 MYRFLQ96LU7 910 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 ACO2Q99798 780 aaKnown RBP7.38□□□□□ -1.23
CHD3-213ENST00000571249 HSD17B14Q9BPX1 270 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 TCHPQ9BT92 498 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 ACE2Q9BYF1 805 aaPredicted RBP7.38□□□□□ -1.23
CHD3-213ENST00000571249 RNF38Q9H0F5 515 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 RPF1Q9H9Y2 349 aaKnown RBP7.38□□□□□ -1.23
CHD3-213ENST00000571249 EBF2Q9HAK2 575 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 PTPRHQ9HD43 1115 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 SMPD4Q9NXE4 827 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 SEL1LQ9UBV2 794 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 VPS4AQ9UN37 437 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 PCDHB5Q9Y5E4 795 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 ENTPD2Q9Y5L3 495 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 RBM8AQ9Y5S9 174 aaKnown RBP7.38□□□□□ -1.23
CHD3-213ENST00000571249 DCHS2Q6V1P9 2916 aa7.38□□□□□ -1.23
CHD3-213ENST00000571249 K7ERI5 159 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 IGLV3-19P01714 112 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 MCF2P10911 925 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 SLC5A2P31639 672 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 PDE6CP51160 858 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 EFNA5P52803 228 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 LILRA4P59901 499 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 CLDN10P78369 228 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 DAB2P98082 770 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 GRIN1Q05586 938 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 ORC1Q13415 861 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 NAA30Q147X3 362 aaPredicted RBP7.37□□□□□ -1.23
CHD3-213ENST00000571249 SAFBQ15424 915 aaKnown RBP eCLIP7.37□□□□□ -1.23
CHD3-213ENST00000571249 ZXDCQ2QGD7 858 aaPredicted RBP7.37□□□□□ -1.23
CHD3-213ENST00000571249 ARSIQ5FYB1 569 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 BORAQ6PGQ7 559 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 TMEM25Q86YD3 366 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 MCEMP1Q8IX19 187 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 DCP1BQ8IZD4 617 aaKnown RBP7.37□□□□□ -1.23
CHD3-213ENST00000571249 THEM5Q8N1Q8 247 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 ARL14Q8N4G2 192 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 KIAA1958Q8N8K9 716 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 SCFD1Q8WVM8 642 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 POLD4Q9HCU8 107 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 TMLHEQ9NVH6 421 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 CFAP97Q9P2B7 532 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 NAP1L2Q9ULW6 460 aaPredicted RBP7.37□□□□□ -1.23
CHD3-213ENST00000571249 PCDHGA8Q9Y5G5 932 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 CPQQ9Y646 472 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 STON1Q9Y6Q2 735 aa7.37□□□□□ -1.23
CHD3-213ENST00000571249 CKAP5Q14008 2032 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 KLF18A0A0U1RQI7 1052 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 GFRA2O00451 464 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms