RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 GRIK2Q13002 908 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 CALCRLQ16602 461 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 GAB4Q2WGN9 574 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 SLC10A6Q3KNW5 377 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 PLEKHG6Q3KR16 790 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 SLC39A12Q504Y0 691 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 SGO2Q562F6 1265 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 MEI1Q5TIA1 1274 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 BLOC1S2Q6QNY1 142 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 MPZL3Q6UWV2 235 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 SV2BQ7L1I2 683 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 CATSPER3Q86XQ3 398 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 SLC41A1Q8IVJ1 513 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 DEFB119Q8N690 84 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
CDH13-212ENST00000569144 OR10T2Q8NGX3 314 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 SPPL2BQ8TCT7 592 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 KIFAP3Q92845 792 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 FCRL3Q96P31 734 aaPredicted RBP6.33□□□□□ -1.4
CDH13-212ENST00000569144 HNRNPABQ99729 332 aaKnown RBP6.33□□□□□ -1.4
CDH13-212ENST00000569144 TCHPQ9BT92 498 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 ZCWPW1Q9H0M4 648 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 FAM124BQ9H5Z6 455 aaPredicted RBP6.33□□□□□ -1.4
CDH13-212ENST00000569144 KRT82Q9NSB4 513 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 UBQLN1Q9UMX0 589 aaKnown RBP6.33□□□□□ -1.4
CDH13-212ENST00000569144 HIF3AQ9Y2N7 669 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 APC2O95996 2303 aa6.33□□□□□ -1.4
CDH13-212ENST00000569144 MYO16Q9Y6X6 1858 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 STK36Q9NRP7 1315 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 NAV2Q8IVL1 2488 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 TRAV19A0A0A6YYK7 116 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 IGHV1OR15-9A0A0B4J2B8 117 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 MYMKA6NI61 221 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 CPLX1O14810 134 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 XPOTO43592 962 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 MED24O75448 989 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 TADA3O75528 432 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 CKMP06732 381 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 ZNF883P0CG24 379 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 HARSP12081 509 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 HLA-EP13747 358 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 GNSP15586 552 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 XBP1P17861 261 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 BMP6P22004 513 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 RPS6KB1P23443 525 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 MAP4P27816 1152 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 EIF2S3P41091 472 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 EIF2DP41214 584 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 TXKP42681 527 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 KIR2DL1P43626 348 aaPredicted RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 SCRN1Q12765 414 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 NOLC1Q14978 699 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDH13-212ENST00000569144 SMAD1Q15797 465 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 ZBTB6Q15916 424 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 EARS2Q5JPH6 523 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 PCSK4Q6UW60 755 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 BEND4Q6ZU67 534 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 DYMQ7RTS9 669 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 GPR155Q7Z3F1 870 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 MARCH9Q86YJ5 346 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 TRIM42Q8IWZ5 723 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 TRIML1Q8N9V2 468 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 SPATA18Q8TC71 538 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 GRIN3AQ8TCU5 1115 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 SH3RF2Q8TEC5 729 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 SETD7Q8WTS6 366 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 SENP8Q96LD8 212 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 HSPA12BQ96MM6 686 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 JAKMIP1Q96N16 626 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 PNKPQ96T60 521 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 CDC6Q99741 560 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 TARS2Q9BW92 718 aaKnown RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 LINC00597Q9H2U6 94 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 C7orf69Q9H7B7 122 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 PLEKHA5Q9HAU0 1116 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 CALCOCO1Q9P1Z2 691 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 ARHGAP28Q9P2N2 729 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 UXTQ9UBK9 157 aaPredicted RBP6.32□□□□□ -1.4
CDH13-212ENST00000569144 VTI1BQ9UEU0 232 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 ACTL7BQ9Y614 415 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 PTPRDP23468 1912 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 PLXND1Q9Y4D7 1925 aa6.32□□□□□ -1.4
CDH13-212ENST00000569144 ACACAQ13085 2346 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 ZNF462Q96JM2 2506 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 ATG2BQ96BY7 2078 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 TTC26A0AVF1 554 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 HMX2A2RU54 273 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 FAM149AA5PLN7 773 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 CCDC169A6NNP5 214 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 FLRT2O43155 660 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 RRP8O43159 456 aaKnown RBP6.31□□□□□ -1.4
CDH13-212ENST00000569144 NEMFO60524 1076 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 ZNF217O75362 1048 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 TOM1L1O75674 476 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 NOL4O94818 638 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 KAT7O95251 611 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 CER1O95813 267 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 APODP05090 189 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 CYP17A1P05093 508 aa6.31□□□□□ -1.4
CDH13-212ENST00000569144 SLFN14P0C7P3 912 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms