RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 ELP3Q9H9T3 547 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 CPSF3Q9UKF6 684 aaKnown RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 PLA2G4CQ9UP65 541 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 PSAT1Q9Y617 370 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 TPP1O14773 563 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 ONECUT3O60422 494 aaPredicted RBP9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 CYP3A5P20815 502 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 SOX11P35716 441 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 CCR10P46092 362 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 RABGAP1LQ5R372 815 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 PPP1R15BQ5SWA1 713 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 ARMC3Q5W041 872 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 RAPH1Q70E73 1250 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 PTAR1Q7Z6K3 402 aaPredicted RBP9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 MAP7D3Q8IWC1 876 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 DNAAF3Q8N9W5 541 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 ZNF483Q8TF39 744 aaPredicted RBP9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 PTCD3Q96EY7 689 aaKnown RBP9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 XAB2Q9HCS7 855 aaKnown RBP9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 ADGRA2Q96PE1 1338 aa9.27□□□□□ -0.92
HDGFL3-206ENST00000568294 MYOCOSA0A1B0GUC4 107 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 A0A1B0GVG6 124 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 SOWAHBA6NEL2 793 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 AIM2O14862 343 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 KRT38O76015 456 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 TXNP10599 105 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 TPH1P17752 444 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 SERPINB5P36952 375 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 BTKQ06187 659 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 TFDP2Q14188 446 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 DLG2Q15700 870 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 KIZQ2M2Z5 673 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 LGSNQ5TDP6 509 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 LRRC38Q5VT99 294 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 HEATR6Q6AI08 1181 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 SLC30A9Q6PML9 568 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 TEX2Q8IWB9 1127 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 SNX31Q8N9S9 440 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 USP33Q8TEY7 942 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 SKA1Q96BD8 255 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 SGF29Q96ES7 293 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 RNF157Q96PX1 679 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 PANX3Q96QZ0 392 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 MRPL45Q9BRJ2 306 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 PHACTR1Q9C0D0 580 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 PAPOLBQ9NRJ5 636 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 SLC7A8Q9UHI5 535 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 CORO1CQ9ULV4 474 aaPredicted RBP9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 TCRBV5S1A1TA0A578 114 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 MAFGO15525 162 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 DCXO43602 365 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 MT-CO1P00395 513 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 CD1EP15812 388 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 GOT1P17174 413 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 AKAP5P24588 427 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 ACAT1P24752 427 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 TYK2P29597 1187 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 ASPHQ12797 758 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 NOMO1Q15155 1222 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 TRIP10Q15642 601 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 ATG16L1Q676U5 607 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 CAND1Q86VP6 1230 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 RASSF3Q86WH2 238 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 STKLD1Q8NE28 680 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 PPP4R1Q8TF05 950 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 MZB1Q8WU39 189 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 USP13Q92995 863 aaPredicted RBP9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 WWP1Q9H0M0 922 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 GOLGA2P5Q9HBQ8 144 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 POPDC2Q9HBU9 364 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 CYLDQ9NQC7 956 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 PAK5Q9P286 719 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 HESX1Q9UBX0 185 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 TEX264Q9Y6I9 313 aa9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 MYH9P35579 1960 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-206ENST00000568294 A8MXQ7 604 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 DNAJC6O75061 913 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 APOEP02649 317 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 TMEM132DQ14C87 1099 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 CCDC14Q49A88 953 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 AP1ARQ63HQ0 302 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 RELL1Q8IUW5 271 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 C10orf107Q8IVU9 208 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 ARHGAP24Q8N264 748 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 ZNF276Q8N554 614 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 CCDC185Q8N715 623 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PNPLA1Q8N8W4 532 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PIP4K2CQ8TBX8 421 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 C18orf25Q96B23 403 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 ALKBH8Q96BT7 664 aaKnown RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 FGD4Q96M96 766 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PCDH18Q9HCL0 1135 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PLLPQ9Y342 182 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 SMAPO00193 183 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PAPSS1O43252 624 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 TRPA1O75762 1119 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PGM3O95394 542 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 ETV4P43268 484 aa9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 PITX1P78337 314 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-206ENST00000568294 CLDN10P78369 228 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms