RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 OR1D2P34982 312 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 TSPY1Q01534 308 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 UBE3AQ05086 875 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 CAMK1Q14012 370 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 ASIC2Q16515 512 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 MDH1BQ5I0G3 518 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 TAF3Q5VWG9 929 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 E4F1Q66K89 784 aaPredicted RBP8.2□□□□□ -1.1
SMG1-214ENST00000568038 RSPO2Q6UXX9 243 aaPredicted RBP8.2□□□□□ -1.1
SMG1-214ENST00000568038 LRRTM3Q86VH5 581 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 SLC47A2Q86VL8 602 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 CNGA4Q8IV77 575 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 C12orf29Q8N999 325 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 SLC4A11Q8NBS3 891 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 B3GALNT2Q8NCR0 500 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 OR8K1Q8NGG5 319 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 TNIP3Q96KP6 325 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 ACBD6Q9BR61 282 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 CRTAC1Q9NQ79 661 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 FAM49BQ9NUQ9 324 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 IMPACTQ9P2X3 320 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 MTRRQ9UBK8 725 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 STK39Q9UEW8 545 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 GTF3C4Q9UKN8 822 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 MYO6Q9UM54 1294 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 CNTN6Q9UQ52 1028 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 CDY1Q9Y6F8 540 aa8.2□□□□□ -1.1
SMG1-214ENST00000568038 MYBPHLA2RUH7 354 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 HIDE1A8MVS5 230 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 CLDN5O00501 218 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 THAP12O43422 761 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 TBC1D4O60343 1298 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 LPXNO60711 386 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 PAEPP09466 180 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 CNPP09543 421 aaKnown RBP8.19□□□□□ -1.1
SMG1-214ENST00000568038 CCDC172P0C7W6 258 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 CCDC130P13994 396 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 CYP11B1P15538 503 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 FERP16591 822 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 ADORA2BP29275 332 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 GNA15P30679 374 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 GSTT1P30711 240 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 ZNF132P52740 706 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 BPIFB4P59827 614 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 KLHL30Q0D2K2 578 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 BNIP3Q12983 259 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 SMC1AQ14683 1233 aaKnown RBP8.19□□□□□ -1.1
SMG1-214ENST00000568038 PTPN14Q15678 1187 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 SLC39A12Q504Y0 691 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 TDRD12Q587J7 1177 aaKnown RBP8.19□□□□□ -1.1
SMG1-214ENST00000568038 ZNF574Q6ZN55 896 aaPredicted RBP8.19□□□□□ -1.1
SMG1-214ENST00000568038 CCDC186Q7Z3E2 898 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 IRF2BP2Q7Z5L9 587 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 KRTAP1-3Q8IUG1 177 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMG1-214ENST00000568038 DCP1BQ8IZD4 617 aaKnown RBP8.19□□□□□ -1.1
SMG1-214ENST00000568038 CRYBG2Q8N1P7 616 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 PLD6Q8N2A8 252 aaKnown RBP8.19□□□□□ -1.1
SMG1-214ENST00000568038 TC2NQ8N9U0 490 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 GRIN3AQ8TCU5 1115 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 TFAP2BQ92481 460 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 ISL2Q96A47 359 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 CYFIP2Q96F07 1278 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 NECAB3Q96P71 396 aaPredicted RBP8.19□□□□□ -1.1
SMG1-214ENST00000568038 PGLYRP2Q96PD5 576 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 CLSTN3Q9BQT9 956 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 ZSWIM1Q9BR11 485 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 MED10Q9BTT4 135 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 DNAI2Q9GZS0 605 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 ZCWPW1Q9H0M4 648 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 FAM124BQ9H5Z6 455 aaPredicted RBP8.19□□□□□ -1.1
SMG1-214ENST00000568038 ABHD10Q9NUJ1 306 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 TMLHEQ9NVH6 421 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 ZNHIT6Q9NWK9 470 aaKnown RBP8.19□□□□□ -1.1
SMG1-214ENST00000568038 AIPL1Q9NZN9 384 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 SLC5A6Q9Y289 635 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 SSX2IPQ9Y2D8 614 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 BACE2Q9Y5Z0 518 aa8.19□□□□□ -1.1
SMG1-214ENST00000568038 TSC2P49815 1807 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 FAM170AA1A519 330 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 C2orf71A6NGG8 1288 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 TEX28O15482 410 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 PTMAP06454 111 aaKnown RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 PLEKP08567 350 aaPredicted RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 VDRP11473 427 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 KLRC2P26717 231 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 PDE6CP51160 858 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 ROR1Q01973 937 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 CREMQ03060 361 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 COL19A1Q14993 1142 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 MAPRE1Q15691 268 aaKnown RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 PTPROQ16827 1216 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 GOLGA7BQ2TAP0 167 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 LCE3BQ5TA77 95 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 SLC8B1Q6J4K2 584 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 FAM171BQ6P995 826 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 WDR59Q6PJI9 974 aa8.18□□□□□ -1.1
SMG1-214ENST00000568038 RBM23Q86U06 439 aaKnown RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 NOP9Q86U38 636 aaKnown RBP8.18□□□□□ -1.1
SMG1-214ENST00000568038 PALB2Q86YC2 1186 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms