RNA–Protein interactions for RNA: ENST00000567868.5

SPSB3-209, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-209ENST00000567868 NACA2Q9H009 215 aa23.32■■□□□ 1.32
SPSB3-209ENST00000567868 RAB6CQ9H0N0 254 aa23.32■■□□□ 1.32
SPSB3-209ENST00000567868 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.32■■□□□ 1.32
SPSB3-209ENST00000567868 PCSK1NQ9UHG2 260 aa23.32■■□□□ 1.32
SPSB3-209ENST00000567868 DNMT3LQ9UJW3 386 aa23.32■■□□□ 1.32
SPSB3-209ENST00000567868 USP18Q9UMW8 372 aa23.32■■□□□ 1.32
SPSB3-209ENST00000567868 PACSIN2Q9UNF0 486 aaPredicted RBP23.32■■□□□ 1.32
SPSB3-209ENST00000567868 CCDC66A2RUB6 948 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 CTAGE9A4FU28 777 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 ENC1O14682 589 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 PRPSAP2O60256 369 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 OAS1P00973 400 aaKnown RBP23.31■■□□□ 1.32
SPSB3-209ENST00000567868 TAS2R40P59535 323 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 LRRC38Q5VT99 294 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 TLR10Q9BXR5 811 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 PIGVQ9NUD9 493 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 MARCH2Q9P0N8 246 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 RASAL2Q9UJF2 1139 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.31■■□□□ 1.32
SPSB3-209ENST00000567868 TRANK1O15050 2925 aa23.31■■□□□ 1.32
SPSB3-209ENST00000567868 C2orf78A6NCI8 922 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 MDM4O15151 490 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 IRAK2O43187 625 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 COCHO43405 550 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 TCF4P15884 667 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 CTNNA2P26232 953 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 CTNNA1P35221 906 aaKnown RBP23.3■■□□□ 1.32
SPSB3-209ENST00000567868 CCR2P41597 374 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 ATXN1P54253 815 aaKnown RBP23.3■■□□□ 1.32
SPSB3-209ENST00000567868 NTHL1P78549 312 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 CYP4F8P98187 520 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 EIF4EBP2Q13542 120 aaPredicted RBP23.3■■□□□ 1.32
SPSB3-209ENST00000567868 CTC1Q2NKJ3 1217 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 SYCE2Q6PIF2 218 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 GPR149Q86SP6 731 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 UBL4BQ8N7F7 174 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 TRPC7Q9HCX4 862 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 CLDND1Q9NY35 253 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 PCDHA3Q9Y5H8 950 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 PSTPIP1O43586 416 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 ATP1A1P05023 1023 aaKnown RBP23.3■■□□□ 1.32
SPSB3-209ENST00000567868 KRT7P08729 469 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 GJA1P17302 382 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 PFKLP17858 780 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 CXCR3P49682 368 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 KPNA1P52294 538 aaPredicted RBP23.3■■□□□ 1.32
SPSB3-209ENST00000567868 SLC25A11Q02978 314 aaKnown RBP23.3■■□□□ 1.32
SPSB3-209ENST00000567868 NNTQ13423 1086 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 ARHGAP15Q53QZ3 475 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 TXNDC8Q6A555 127 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 FAM131BQ86XD5 332 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 SHKBP1Q8TBC3 707 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 RNF34Q969K3 372 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 TCEAL4Q96EI5 215 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 WDCPQ9H6R7 721 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 WDR6Q9NNW5 1121 aaKnown RBP23.3■■□□□ 1.32
SPSB3-209ENST00000567868 CLEC1BQ9P126 229 aa23.3■■□□□ 1.32
SPSB3-209ENST00000567868 CDH23Q9H251 3354 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 SOBPA7XYQ1 873 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 HDCP19113 662 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 DDX6P26196 483 aaKnown RBP eCLIP23.29■■□□□ 1.322e-6■■■■□ 26.3
SPSB3-209ENST00000567868 BOLA3Q53S33 107 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 HABP4Q5JVS0 413 aaKnown RBP23.29■■□□□ 1.32
SPSB3-209ENST00000567868 PRSS36Q5K4E3 855 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 POLNQ7Z5Q5 900 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 MIB1Q86YT6 1006 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 MICALL1Q8N3F8 863 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 ZNF592Q92610 1267 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 APOL5Q9BWW9 433 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 RNF38Q9H0F5 515 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 ZWILCHQ9H900 591 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 TLR6Q9Y2C9 796 aa23.29■■□□□ 1.32
SPSB3-209ENST00000567868 PRRC2BQ5JSZ5 2229 aaKnown RBP23.29■■□□□ 1.32
SPSB3-209ENST00000567868 SLC12A8A0AV02 714 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 FANCGO15287 622 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 DDX3YO15523 660 aaKnown RBP23.28■■□□□ 1.32
SPSB3-209ENST00000567868 MSI1O43347 362 aaKnown RBP23.28■■□□□ 1.32
SPSB3-209ENST00000567868 MOSPD3O75425 235 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 IL1R2P27930 398 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 PEX5P50542 639 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 TBX4P57082 545 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 TRIP4Q15650 581 aaPredicted RBP23.28■■□□□ 1.32
SPSB3-209ENST00000567868 SLC5A9Q2M3M2 681 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 EP400NLQ6ZTU2 488 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 KRT35Q92764 455 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 PABPC5Q96DU9 382 aaKnown RBP23.28■■□□□ 1.32
SPSB3-209ENST00000567868 PEBP4Q96S96 227 aa23.28■■□□□ 1.32
SPSB3-209ENST00000567868 MRPS23Q9Y3D9 190 aaKnown RBP23.28■■□□□ 1.32
SPSB3-209ENST00000567868 HBS1LQ9Y450 684 aaKnown RBP23.28■■□□□ 1.32
SPSB3-209ENST00000567868 OLFM2O95897 454 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 CCR1P32246 355 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 GJC1P36383 396 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 DNA2P51530 1060 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 COG7P83436 770 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 ITIH3Q06033 890 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 COL19A1Q14993 1142 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 TEAD2Q15562 447 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 ARL13BQ3SXY8 428 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 BRMS1LQ5PSV4 323 aa23.27■■□□□ 1.32
SPSB3-209ENST00000567868 ERMARDQ5T6L9 678 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms