RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 RASAL2Q9UJF2 1139 aa12.97□□□□□ -0.33
RNF40-211ENST00000567365 NAALADL1Q9UQQ1 740 aa12.97□□□□□ -0.33
RNF40-211ENST00000567365 CEP83Q9Y592 693 aa12.97□□□□□ -0.33
RNF40-211ENST00000567365 MIA3Q5JRA6 1907 aa12.97□□□□□ -0.33
RNF40-211ENST00000567365 KIAA1549LQ6ZVL6 1849 aa12.97□□□□□ -0.33
RNF40-211ENST00000567365 MYO15AQ9UKN7 3530 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 TCRBV5S1A1TA0A578 114 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 CBFA2T2O43439 604 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 HSF2BPO75031 334 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 IRF1P10914 325 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 CD72P21854 359 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 HNRNPH3P31942 346 aaKnown RBP12.96□□□□□ -0.33
RNF40-211ENST00000567365 GJA4P35212 333 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 GSCP56915 257 aaPredicted RBP12.96□□□□□ -0.33
RNF40-211ENST00000567365 PITX1P78337 314 aaPredicted RBP12.96□□□□□ -0.33
RNF40-211ENST00000567365 ZBED6P86452 979 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 ARID5AQ03989 594 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 RING1Q06587 406 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 DHCR24Q15392 516 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 C2CD6Q53TS8 623 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 EFHC1Q5JVL4 640 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 OTUD1Q5VV17 481 aaPredicted RBP12.96□□□□□ -0.33
RNF40-211ENST00000567365 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
RNF40-211ENST00000567365 RSRC2Q7L4I2 434 aaKnown RBP12.96□□□□□ -0.33
RNF40-211ENST00000567365 ARCQ7LC44 396 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 ZNF571Q7Z3V5 609 aaPredicted RBP12.96□□□□□ -0.33
RNF40-211ENST00000567365 BNIPLQ7Z465 357 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 ERICH1Q86X53 443 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 CCDC105Q8IYK2 499 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 TMEM105Q8N8V8 129 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 PJA1Q8NG27 643 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 IPO4Q8TEX9 1081 aaKnown RBP12.96□□□□□ -0.33
RNF40-211ENST00000567365 ATP2A3Q93084 1043 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 NT5C3BQ969T7 300 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 CLDN23Q96B33 292 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 POPDC2Q9HBU9 364 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 STOML2Q9UJZ1 356 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 TMEM59LQ9UK28 342 aa12.96□□□□□ -0.33
RNF40-211ENST00000567365 MTF2Q9Y483 593 aaPredicted RBP12.96□□□□□ -0.33
RNF40-211ENST00000567365 VPS13AQ96RL7 3174 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 SLC12A8A0AV02 714 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 MAN2B1O00754 1011 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 MSI1O43347 362 aaKnown RBP12.95□□□□□ -0.34
RNF40-211ENST00000567365 DAB1O75553 588 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 NFATC1O95644 943 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 TPM3P06753 285 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 CCDC172P0C7W6 258 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 CHRM1P11229 460 aaPredicted RBP12.95□□□□□ -0.34
RNF40-211ENST00000567365 NCAM1P13591 858 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 AVPR2P30518 371 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 OPRD1P41143 372 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 SNX16P57768 344 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 ASIC2Q16515 512 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 SFMBT2Q5VUG0 894 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 NAIF1Q69YI7 327 aaPredicted RBP12.95□□□□□ -0.34
RNF40-211ENST00000567365 SPECC1LQ69YQ0 1117 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 OR6B2Q6IFH4 312 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 TRNP1Q6NT89 227 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 C1orf228Q6PIY5 440 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 TOGARAM2Q6ZUX3 1019 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 MON1BQ7L1V2 547 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 TAC4Q86UU9 113 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 DEFB106AQ8N104 65 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 CPA6Q8N4T0 437 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 SLC30A5Q8TAD4 765 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 TTC8Q8TAM2 541 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 RNF139Q8WU17 664 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 EZH1Q92800 747 aaPredicted RBP12.95□□□□□ -0.34
RNF40-211ENST00000567365 AZIN2Q96A70 460 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 FAM149B1Q96BN6 582 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 PLD4Q96BZ4 506 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 FCRL2Q96LA5 508 aaPredicted RBP12.95□□□□□ -0.34
RNF40-211ENST00000567365 NELL2Q99435 816 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 TRIM62Q9BVG3 475 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 DCLK3Q9C098 648 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 NUCKS1Q9H1E3 243 aaKnown RBP12.95□□□□□ -0.34
RNF40-211ENST00000567365 PDCL3Q9H2J4 239 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 FBRSL1Q9HCM7 1045 aaKnown RBP12.95□□□□□ -0.34
RNF40-211ENST00000567365 MARK1Q9P0L2 795 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 AGO1Q9UL18 857 aaKnown RBP12.95□□□□□ -0.34
RNF40-211ENST00000567365 STRIP2Q9ULQ0 834 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 SH3BP1Q9Y3L3 701 aa12.95□□□□□ -0.34
RNF40-211ENST00000567365 DDX3XO00571 662 aaKnown RBP eCLIP12.94□□□□□ -0.34
RNF40-211ENST00000567365 TRDMT1O14717 391 aaKnown RBP12.94□□□□□ -0.34
RNF40-211ENST00000567365 IRAK2O43187 625 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 HOXC11O43248 304 aaPredicted RBP12.94□□□□□ -0.34
RNF40-211ENST00000567365 LATS1O95835 1130 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 TRUB2O95900 331 aaKnown RBP12.94□□□□□ -0.34
RNF40-211ENST00000567365 CHRNB1P11230 501 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 CORO1AP31146 461 aaKnown RBP12.94□□□□□ -0.34
RNF40-211ENST00000567365 CASP14P31944 242 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 NOS2P35228 1153 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 KPNA1P52294 538 aaPredicted RBP12.94□□□□□ -0.34
RNF40-211ENST00000567365 GOLGA8FQ08AF8 430 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 GOLGA8DPQ0D2H9 430 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 TCF15Q12870 199 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms