RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CLEC20AQ6ZU45 233 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 PDZD3Q86UT5 571 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 C12orf56Q8IXR9 622 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 GRAMD1CQ8IYS0 662 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 FOXJ1Q92949 421 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 MKRN2Q9H000 416 aaKnown RBP16.32■□□□□ 0.2
PALB2-205ENST00000567003 CUEDC2Q9H467 287 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 PRDM16Q9HAZ2 1276 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 CYLDQ9NQC7 956 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 WSB2Q9NYS7 404 aaPredicted RBP16.32■□□□□ 0.2
PALB2-205ENST00000567003 PCOLCE2Q9UKZ9 415 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 SCML2Q9UQR0 700 aa16.32■□□□□ 0.2
PALB2-205ENST00000567003 FNDC3AQ9Y2H6 1198 aaKnown RBP16.32■□□□□ 0.2
PALB2-205ENST00000567003 GOLGA4Q13439 2230 aaKnown RBP16.31■□□□□ 0.2
PALB2-205ENST00000567003 HMBSP08397 361 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
PALB2-205ENST00000567003 ASPAP45381 313 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 SNRPFP62306 86 aaKnown RBP16.31■□□□□ 0.2
PALB2-205ENST00000567003 AMPD3Q01432 767 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 GOLGA8FQ08AF8 430 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 GOLGA8DPQ0D2H9 430 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 CUL4BQ13620 913 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 GEN1Q17RS7 908 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 KNOP1Q1ED39 458 aaKnown RBP16.31■□□□□ 0.2
PALB2-205ENST00000567003 C10orf120Q5SQS8 335 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 DCAF12L1Q5VU92 463 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 SPDYE1Q8NFV5 336 aaPredicted RBP16.31■□□□□ 0.2
PALB2-205ENST00000567003 SETD7Q8WTS6 366 aaKnown RBP16.31■□□□□ 0.2
PALB2-205ENST00000567003 CCDC86Q9H6F5 360 aaKnown RBP16.31■□□□□ 0.2
PALB2-205ENST00000567003 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
PALB2-205ENST00000567003 USP36Q9P275 1121 aaKnown RBP16.31■□□□□ 0.2
PALB2-205ENST00000567003 RAXQ9Y2V3 346 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 SLCO1B1Q9Y6L6 691 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 CKAP5Q14008 2032 aa16.31■□□□□ 0.2
PALB2-205ENST00000567003 CABIN1Q9Y6J0 2220 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 A0A1B0GTW7 788 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 GFRA2O00451 464 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 STC2O76061 302 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 KLKB1P03952 638 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 AFMP43652 599 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 MFAP3P55082 362 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 STARD3Q14849 445 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 SCD5Q86SK9 330 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 CRYBG2Q8N1P7 616 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 HNRNPLLQ8WVV9 542 aaKnown RBP16.3■□□□□ 0.2
PALB2-205ENST00000567003 SORCS1Q8WY21 1168 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 DNASE2BQ8WZ79 361 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 GAREM1Q9H706 876 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 DNMT3LQ9UJW3 386 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 NAGPAQ9UK23 515 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 FBXO10Q9UK96 956 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 CLEC4EQ9ULY5 219 aa16.3■□□□□ 0.2
PALB2-205ENST00000567003 TMEM131Q92545 1883 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 GOLGA8CPA6NN73 597 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 POLR2DO15514 142 aaKnown RBP16.29■□□□□ 0.2
PALB2-205ENST00000567003 CILPO75339 1184 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 PRKCHP24723 683 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 PLA2G4AP47712 749 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 TPMTP51580 245 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 CLDN10P78369 228 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 FOXD4L6Q3SYB3 417 aaPredicted RBP16.29■□□□□ 0.2
PALB2-205ENST00000567003 FOXD4L5Q5VV16 416 aaPredicted RBP16.29■□□□□ 0.2
PALB2-205ENST00000567003 FYB2Q5VWT5 728 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 FOXD4L3Q6VB84 417 aaPredicted RBP16.29■□□□□ 0.2
PALB2-205ENST00000567003 FAM124AQ86V42 546 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 FOXD4L4Q8WXT5 416 aaPredicted RBP16.29■□□□□ 0.2
PALB2-205ENST00000567003 ITM2CQ9NQX7 267 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 THAP10Q9P2Z0 257 aaPredicted RBP16.29■□□□□ 0.2
PALB2-205ENST00000567003 EIF2B4Q9UI10 523 aaKnown RBP16.29■□□□□ 0.2
PALB2-205ENST00000567003 RASAL2Q9UJF2 1139 aa16.29■□□□□ 0.2
PALB2-205ENST00000567003 APOBEC2Q9Y235 224 aaKnown RBP16.29■□□□□ 0.2
PALB2-205ENST00000567003 URB1O60287 2271 aaKnown RBP16.28■□□□□ 0.2
PALB2-205ENST00000567003 STX6O43752 255 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 CUTAO60888 179 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 PPP6R2O75170 966 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 KIF20AO95235 890 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 PENKP01210 267 aaPredicted RBP16.28■□□□□ 0.2
PALB2-205ENST00000567003 HLA-DRAP01903 254 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 ATXN1LP0C7T5 689 aaKnown RBP16.28■□□□□ 0.2
PALB2-205ENST00000567003 P4HA1P13674 534 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 PIK3CAP42336 1068 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 AP3M2P53677 418 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 ZACNQ401N2 412 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 C1orf220Q5T0J3 134 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 TMPRSS6Q8IU80 811 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 SNX19Q92543 992 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 SIPA1Q96FS4 1042 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 BBC3Q96PG8 261 aaPredicted RBP16.28■□□□□ 0.2
PALB2-205ENST00000567003 HNRNPABQ99729 332 aaKnown RBP16.28■□□□□ 0.2
PALB2-205ENST00000567003 ZDHHC5Q9C0B5 715 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 ZSCAN16Q9H4T2 348 aaPredicted RBP16.28■□□□□ 0.2
PALB2-205ENST00000567003 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
PALB2-205ENST00000567003 TM7SF3Q9NS93 570 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 TOR4AQ9NXH8 423 aa16.28■□□□□ 0.2
PALB2-205ENST00000567003 CGNQ9P2M7 1197 aaKnown RBP16.28■□□□□ 0.2
PALB2-205ENST00000567003 A0A1B0GVT2 93 aa16.27■□□□□ 0.2
PALB2-205ENST00000567003 BCAT2O15382 392 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms