RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 DMAP1Q9NPF5 467 aaPredicted RBP4.48□□□□□ -1.69
LPCAT2-208ENST00000566915 METTL5Q9NRN9 209 aaKnown RBP4.48□□□□□ -1.69
LPCAT2-208ENST00000566915 NINJ2Q9NZG7 142 aa4.48□□□□□ -1.69
LPCAT2-208ENST00000566915 LSM7Q9UK45 103 aaKnown RBP4.48□□□□□ -1.69
LPCAT2-208ENST00000566915 MAGED2Q9UNF1 606 aaPredicted RBP4.48□□□□□ -1.69
LPCAT2-208ENST00000566915 DNAJC16Q9Y2G8 782 aa4.48□□□□□ -1.69
LPCAT2-208ENST00000566915 DUSP10Q9Y6W6 482 aa4.48□□□□□ -1.69
LPCAT2-208ENST00000566915 TMEM114B3SHH9 223 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 H7C0S8 307 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 DFFAO00273 331 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 NEMP1O14524 444 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 VPS26AO75436 327 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PSMG1O95456 288 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SGPL1O95470 568 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 FAM200BP0CF97 657 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TXNP10599 105 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TGFB3P10600 412 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 LCP1P13796 627 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ATP6V1C1P21283 382 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CYP2C18P33260 490 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 OAZ1P54368 228 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 NR1H2P55055 460 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 KCNA1Q09470 495 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TBL3Q12788 808 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 MPP3Q13368 585 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 BAATQ14032 418 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 POLNQ7Z5Q5 900 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF786Q8N393 782 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 GALNT4Q8N4A0 578 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 MTMR14Q8NCE2 650 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SLAIN1Q8ND83 568 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 STKLD1Q8NE28 680 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ETNPPLQ8TBG4 499 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF75CPQ92670 426 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SH3GL2Q99962 352 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 RUSC1Q9BVN2 902 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 UGT2B28Q9BY64 529 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 LRMDAQ9H2I8 198 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SSU72Q9NP77 194 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF446Q9NWS9 450 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 COMMD8Q9NX08 183 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 C6orf203Q9P0P8 240 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 DSEQ9UL01 958 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC39A10Q9ULF5 831 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PRPF19Q9UMS4 504 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TPRKBQ9Y3C4 175 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF541Q9H0D2 1346 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ABCA3Q99758 1704 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 LOC100653049A0A140TA62 436 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 KLRG2A4D1S0 409 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PRR23AA6NEV1 266 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TBKBP1A7MCY6 615 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TULP2O00295 520 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 C2CD2LO14523 706 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TRIM24O15164 1050 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 UBDO15205 165 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 KRT34O76011 436 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 LCA5LO95447 670 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 BCL10O95999 233 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CCDC130P13994 396 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 RRM1P23921 792 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PBX1P40424 430 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 RPL5P46777 297 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 RPL21P46778 160 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PIK3CGP48736 1102 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SNAP25P60880 206 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 POU4F1Q01851 419 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 RIPPLY1Q0D2K3 151 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 MMRN1Q13201 1228 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 KRT33BQ14525 404 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CNGA2Q16280 664 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 HIST2H2ACQ16777 129 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 BMT2Q1RMZ1 405 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 FAM98BQ52LJ0 330 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 HABP4Q5JVS0 413 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PLA2G4FQ68DD2 849 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 HIST2H2AA3Q6FI13 130 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PLEKHH3Q7Z736 793 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CAMK1DQ8IU85 385 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 RNF135Q8IUD6 432 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 IQCKQ8N0W5 287 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC7A14Q8TBB6 771 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PHF21AQ96BD5 680 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PPP1R14BQ96C90 147 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 PLEKHA8Q96JA3 519 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SRPK1Q96SB4 655 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 TSPAN18Q96SJ8 248 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 DHX33Q9H6R0 707 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 HMG20AQ9NP66 347 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.47□□□□□ -1.693e-6■□□□□ 9.6
LPCAT2-208ENST00000566915 H2AFY2Q9P0M6 372 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 STK39Q9UEW8 545 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 ITGA11Q9UKX5 1188 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 USP18Q9UMW8 372 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 C2orf81A6NN90 581 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 NFKBIEO00221 500 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 KPNA6O60684 536 aa4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 CNOT3O75175 753 aaKnown RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 SEC24DO94855 1032 aaPredicted RBP4.47□□□□□ -1.69
LPCAT2-208ENST00000566915 MED26O95402 600 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms