RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 FAM96AQ9H5X1 160 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 SLC38A10Q9HBR0 1119 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 TMOD2Q9NZR1 351 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 PCSK1NQ9UHG2 260 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 MAFGO15525 162 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 ITM2AO43736 263 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 FGF3P11487 239 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-215ENST00000566843 RAG1P15918 1043 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 KCNA2P16389 499 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 ITGAXP20702 1163 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 MAGEA3P43357 314 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 NAMPTP43490 491 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 EPHB1P54762 984 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 MYL6P60660 151 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 TFDP2Q14188 446 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 EMC2Q15006 297 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 ZNF394Q53GI3 561 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 SYCP2LQ5T4T6 812 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 XYLT1Q86Y38 959 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 CPXCR1Q8N123 301 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 POU5F2Q8N7G0 328 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 HSPH1Q92598 858 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 PREBQ9HCU5 417 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 PLK2Q9NYY3 685 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 CLIC5Q9NZA1 410 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 CIDEBQ9UHD4 219 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 GMEB1Q9Y692 573 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 BRCA1P38398 1863 aaKnown RBP16.21■□□□□ 0.19
COMMD4-215ENST00000566843 CNTNAP1P78357 1384 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 K7ERI5 159 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 PDE5AO76074 875 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 SORBS2O94875 1100 aaKnown RBP16.21■□□□□ 0.19
COMMD4-215ENST00000566843 PROCP04070 461 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 PRDX6P30041 224 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 FDFT1P37268 417 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 INHBCP55103 352 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.21■□□□□ 0.19
COMMD4-215ENST00000566843 ARHGEF16Q5VV41 709 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 TMC7Q7Z402 723 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 MAVSQ7Z434 540 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 VSIG10LQ86VR7 867 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 ALDH16A1Q8IZ83 802 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 EMC1Q8N766 993 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 ICA1LQ8NDH6 482 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 IRGQQ8WZA9 623 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 NMD3Q96D46 503 aaKnown RBP16.21■□□□□ 0.19
COMMD4-215ENST00000566843 CALN1Q9BXU9 219 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 CHCHD3Q9NX63 227 aaKnown RBP16.21■□□□□ 0.19
COMMD4-215ENST00000566843 FBXO40Q9UH90 709 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 USP18Q9UMW8 372 aa16.21■□□□□ 0.19
COMMD4-215ENST00000566843 H7C0C1 242 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 LYPLA1O75608 230 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-215ENST00000566843 TOM1L1O75674 476 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 EDN1P05305 212 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 TFAP2AP05549 437 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 CNTFP26441 200 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 ATP5OP48047 213 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 SLC1A6P48664 564 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 IDH3AP50213 366 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 HIRAP54198 1017 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-215ENST00000566843 MMRN1Q13201 1228 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 SH2D4BQ5SQS7 431 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 B3GNT6Q6ZMB0 384 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 CCDC60Q8IWA6 550 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-215ENST00000566843 FBXW8Q8N3Y1 598 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 GSDMBQ8TAX9 411 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 LZICQ8WZA0 190 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 CMTM5Q96DZ9 223 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 PEBP4Q96S96 227 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 PORCNQ9H237 461 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 HOMER2Q9NSB8 354 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 EMCNQ9ULC0 261 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 DTNAQ9Y4J8 743 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 WDR46O15213 610 aaKnown RBP16.2■□□□□ 0.18
COMMD4-215ENST00000566843 CCND2P30279 289 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 ARL2P36404 184 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 USP46P62068 366 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 MTERF2Q49AM1 385 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 XKR3Q5GH77 459 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 MROH9Q5TGP6 573 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 CYP4V2Q6ZWL3 525 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-215ENST00000566843 NIM1KQ8IY84 436 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 PPP1R14CQ8TAE6 165 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 DEPTORQ8TB45 409 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 ACMSDQ8TDX5 336 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 TFB1MQ8WVM0 346 aaKnown RBP16.2■□□□□ 0.18
COMMD4-215ENST00000566843 SIGLEC10Q96LC7 697 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 MMP19Q99542 508 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 RBM38Q9H0Z9 239 aaKnown RBP16.2■□□□□ 0.18
COMMD4-215ENST00000566843 TMEM134Q9H6X4 195 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 GALNT8Q9NY28 637 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-215ENST00000566843 TELO2Q9Y4R8 837 aa16.2■□□□□ 0.18
COMMD4-215ENST00000566843 KAT6AQ92794 2004 aa16.19■□□□□ 0.18
COMMD4-215ENST00000566843 ZNF195O14628 629 aa16.19■□□□□ 0.18
COMMD4-215ENST00000566843 ACAT1P24752 427 aaKnown RBP16.19■□□□□ 0.18
COMMD4-215ENST00000566843 MTTPP55157 894 aa16.19■□□□□ 0.18
COMMD4-215ENST00000566843 MTMR2Q13614 643 aa16.19■□□□□ 0.18
COMMD4-215ENST00000566843 TLR1Q15399 786 aa16.19■□□□□ 0.18
COMMD4-215ENST00000566843 TRMT10BQ6PF06 316 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms