RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 AMPD1P23109 780 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 EIF3EP60228 445 aaKnown RBP11.8□□□□□ -0.52
LINC00562-201ENST00000566385 USP46P62068 366 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 GBE1Q04446 702 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 CALCOCO2Q13137 446 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 CFAP58Q5T655 872 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 SLC9A4Q6AI14 798 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 C4orf50Q6ZRC1 276 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 FAM71DQ8N9W8 422 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.8□□□□□ -0.52
LINC00562-201ENST00000566385 P3H4Q92791 437 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 CSPG4P5Q96PW8 444 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 C11orf49Q9H6J7 331 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 CWH43Q9H720 699 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 NMUR1Q9HB89 426 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 DDIT4Q9NX09 232 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 OSER1Q9NX31 292 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 WHRNQ9P202 907 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 STAP1Q9ULZ2 295 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 NFS1Q9Y697 457 aa11.8□□□□□ -0.52
LINC00562-201ENST00000566385 SF3B1O75533 1304 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00562-201ENST00000566385 RPL17P18621 184 aaKnown RBP11.79□□□□□ -0.52
LINC00562-201ENST00000566385 ITIH2P19823 946 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 RDXP35241 583 aaKnown RBP11.79□□□□□ -0.52
LINC00562-201ENST00000566385 GPS1Q13098 491 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 NOMO1Q15155 1222 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 CNKSR3Q6P9H4 555 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 RNF19BQ6ZMZ0 732 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 SYDE1Q6ZW31 735 aaPredicted RBP11.79□□□□□ -0.52
LINC00562-201ENST00000566385 SCD5Q86SK9 330 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 CCDC89Q8N998 374 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 ARL8AQ96BM9 186 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 FAF2Q96CS3 445 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 ZNF670Q9BS34 389 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00562-201ENST00000566385 SNX10Q9Y5X0 201 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 MYO16Q9Y6X6 1858 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 HOXA2O43364 376 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 CREB3O43889 395 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 GAD2Q05329 585 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 IZUMO3Q5VZ72 239 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 TP53INP2Q8IXH6 220 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 LRRC43Q8N309 656 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 UHMK1Q8TAS1 419 aaKnown RBP11.79□□□□□ -0.52
LINC00562-201ENST00000566385 TOP1MTQ969P6 601 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 MRPL9Q9BYD2 267 aaKnown RBP11.79□□□□□ -0.52
LINC00562-201ENST00000566385 PNPLA8Q9NP80 782 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 ANAPC5Q9UJX4 755 aa11.79□□□□□ -0.52
LINC00562-201ENST00000566385 C2CD2LO14523 706 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 APOL1O14791 398 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 TBC1D4O60343 1298 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 RNF40O75150 1001 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 CAPN15O75808 1086 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 PARNO95453 639 aaKnown RBP11.78□□□□□ -0.52
LINC00562-201ENST00000566385 SHBGP04278 402 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 CPB1P15086 417 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 ADRA1BP35368 520 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 ALDH7A1P49419 539 aaKnown RBP11.78□□□□□ -0.52
LINC00562-201ENST00000566385 PMS2P54278 862 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 TFDP2Q14188 446 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 SYCP2LQ5T4T6 812 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 ALS2CLQ60I27 953 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 ZNF280DQ6N043 979 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 TAC4Q86UU9 113 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
LINC00562-201ENST00000566385 LRRC45Q96CN5 670 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 SH3GL2Q99962 352 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 SFMBT1Q9UHJ3 866 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
LINC00562-201ENST00000566385 C5orf42Q9H799 3197 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 YWHAGP61981 247 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC00562-201ENST00000566385 LMNB2Q03252 620 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 MTM1Q13496 603 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 MTMR3Q13615 1198 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 TTMPQ5BVD1 217 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 NCBP2-AS2Q69YL0 99 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 DQX1Q8TE96 717 aaKnown RBP11.78□□□□□ -0.52
LINC00562-201ENST00000566385 NCAPGQ9BPX3 1015 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 USP29Q9HBJ7 922 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 VPS18Q9P253 973 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 CDY1Q9Y6F8 540 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 MRPL42Q9Y6G3 142 aaKnown RBP11.78□□□□□ -0.52
LINC00562-201ENST00000566385 BPTFQ12830 3046 aa11.78□□□□□ -0.52
LINC00562-201ENST00000566385 LTBP2Q14767 1821 aa11.77□□□□□ -0.52
LINC00562-201ENST00000566385 A0A1W2PQH9 124 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 MTMR11A4FU01 709 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 MCF2LO15068 1137 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 MSI1O43347 362 aaKnown RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 EFEMP2O95967 443 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 TIMP1P01033 207 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 RBL1P28749 1068 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 RPL22P35268 128 aaKnown RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 DUSP4Q13115 394 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 SLC29A2Q14542 456 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 NFE2Q16621 373 aaPredicted RBP11.77□□□□□ -0.53
LINC00562-201ENST00000566385 HSP90B2PQ58FF3 399 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 KCTD16Q68DU8 428 aa11.77□□□□□ -0.53
LINC00562-201ENST00000566385 HIBCHQ6NVY1 386 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms