RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 DHTKD1Q96HY7 919 aaPredicted RBP19.22■□□□□ 0.67
USB1-213ENST00000566292 ULBP1Q9BZM6 244 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 CD248Q9HCU0 757 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 FBXO10Q9UK96 956 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 CIZ1Q9ULV3 898 aaPredicted RBP19.22■□□□□ 0.67
USB1-213ENST00000566292 PATE3B3GLJ2 98 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 ACACBO00763 2458 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 XPO1O14980 1071 aaKnown RBP19.21■□□□□ 0.67
USB1-213ENST00000566292 ZBED1O96006 694 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 CORO1AP31146 461 aaKnown RBP19.21■□□□□ 0.67
USB1-213ENST00000566292 DGKGP49619 791 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 BCAT1P54687 386 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 SLC8A3P57103 927 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 STIM1Q13586 685 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 FYB2Q5VWT5 728 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 RNF43Q68DV7 783 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 CYP2U1Q7Z449 544 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 ARHGAP18Q8N392 663 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 DDX1Q92499 740 aaKnown RBP19.21■□□□□ 0.67
USB1-213ENST00000566292 SPACA7Q96KW9 195 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 CEP63Q96MT8 703 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 EDEM2Q9BV94 578 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 METTL14Q9HCE5 456 aaKnown RBP19.21■□□□□ 0.67
USB1-213ENST00000566292 MARCH2Q9P0N8 246 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 AGO1Q9UL18 857 aaKnown RBP19.21■□□□□ 0.67
USB1-213ENST00000566292 ZNF510Q9Y2H8 683 aa19.21■□□□□ 0.67
USB1-213ENST00000566292 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 LNP1A1A4G5 178 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 PPP1R3GB7ZBB8 358 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 PENKP01210 267 aaPredicted RBP19.2■□□□□ 0.66
USB1-213ENST00000566292 CD19P15391 556 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 KCNA4P22459 653 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 YWHAEP62258 255 aaKnown RBP19.2■□□□□ 0.66
USB1-213ENST00000566292 BST2Q10589 180 aaKnown RBP19.2■□□□□ 0.66
USB1-213ENST00000566292 KLHL10Q6JEL2 608 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 KIAA1211LQ6NV74 962 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 TTI2Q6NXR4 508 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 TMEFF1Q8IYR6 380 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 UBA3Q8TBC4 463 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 ERLEC1Q96DZ1 483 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 DCLK3Q9C098 648 aa19.2■□□□□ 0.66
USB1-213ENST00000566292 SLC12A8A0AV02 714 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 O00370 1275 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 PMM2O15305 246 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 MAP3K13O43283 966 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 GADD45BO75293 160 aaPredicted RBP19.19■□□□□ 0.66
USB1-213ENST00000566292 VDRP11473 427 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 TBXAS1P24557 533 aaPredicted RBP19.19■□□□□ 0.66
USB1-213ENST00000566292 PTGER3P43115 390 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 ADIGQ0VDE8 80 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 CCDC40Q4G0X9 1142 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 PKDCCQ504Y2 493 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 RSRC2Q7L4I2 434 aaKnown RBP19.19■□□□□ 0.66
USB1-213ENST00000566292 ARMCX6Q7L4S7 300 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 LPCAT2Q7L5N7 544 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 DENND1CQ8IV53 801 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 CHPFQ8IZ52 775 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 LMO3Q8TAP4 145 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 IPO4Q8TEX9 1081 aaKnown RBP19.19■□□□□ 0.66
USB1-213ENST00000566292 TFAP2BQ92481 460 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 PIGKQ92643 395 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 KAT5Q92993 513 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 CNTNAP3BQ96NU0 1288 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 GABRG3Q99928 467 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 LSM14BQ9BX40 385 aaKnown RBP19.19■□□□□ 0.66
USB1-213ENST00000566292 CNTNAP3Q9BZ76 1288 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 CALCOCO1Q9P1Z2 691 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 HESX1Q9UBX0 185 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 STRIP2Q9ULQ0 834 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 ADAMTS9Q9P2N4 1935 aa19.19■□□□□ 0.66
USB1-213ENST00000566292 CHD8Q9HCK8 2581 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 C4orf47A7E2U8 309 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 KHNYNO15037 678 aaKnown RBP19.18■□□□□ 0.66
USB1-213ENST00000566292 CHKAP35790 457 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 PPP1R2P41236 205 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 MFAP3P55082 362 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 BYSLQ13895 437 aaKnown RBP19.18■□□□□ 0.66
USB1-213ENST00000566292 MORC3Q14149 939 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 TMEM270Q6UE05 265 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 NELFBQ8WX92 580 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 NT5C1BQ96P26 610 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 ZSWIM1Q9BR11 485 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 LRRC4Q9HBW1 653 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 TMEM74BQ9NUR3 256 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 CACNA2D2Q9NY47 1150 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 CLEC4EQ9ULY5 219 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 SLC27A6Q9Y2P4 619 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 RAD54BQ9Y620 910 aa19.18■□□□□ 0.66
USB1-213ENST00000566292 ASCC3Q8N3C0 2202 aaKnown RBP19.17■□□□□ 0.66
USB1-213ENST00000566292 CKAP5Q14008 2032 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 YJEFN3A6XGL0 299 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 WASH3PC4AMC7 463 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 E7ENQ6 273 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 RNF225M0QZC1 329 aaPredicted RBP19.17■□□□□ 0.66
USB1-213ENST00000566292 GABBR2O75899 941 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 PAEPP09466 180 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 NDUFV2P19404 249 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 IRX4P78413 519 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 TRIP4Q15650 581 aaPredicted RBP19.17■□□□□ 0.66
USB1-213ENST00000566292 GEN1Q17RS7 908 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms