RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 FBXO10Q9UK96 956 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 CIZ1Q9ULV3 898 aaPredicted RBP20.84■□□□□ 0.93
CLN6-206ENST00000565471 DNAH14Q0VDD8 3507 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 PLXND1Q9Y4D7 1925 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 CAVIN2O95810 425 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 PENKP01210 267 aaPredicted RBP20.83■□□□□ 0.93
CLN6-206ENST00000565471 CISD3P0C7P0 127 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 HOXB2P14652 356 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 CORO1AP31146 461 aaKnown RBP20.83■□□□□ 0.93
CLN6-206ENST00000565471 PKDCCQ504Y2 493 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 EGFLAMQ63HQ2 1017 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 BHLHA9Q7RTU4 235 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 SCML4Q8N228 414 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 LMO3Q8TAP4 145 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 SMOC1Q9H4F8 434 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 RXFP3Q9NSD7 469 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 OLA1Q9NTK5 396 aaKnown RBP20.83■□□□□ 0.93
CLN6-206ENST00000565471 CTNND2Q9UQB3 1225 aa20.83■□□□□ 0.93
CLN6-206ENST00000565471 PRRT4C9JH25 899 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 GADD45BO75293 160 aaPredicted RBP20.82■□□□□ 0.92
CLN6-206ENST00000565471 GNA14O95837 355 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 MARSP56192 900 aaKnown RBP20.82■□□□□ 0.92
CLN6-206ENST00000565471 ADIGQ0VDE8 80 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 MAP7D1Q3KQU3 841 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 IL31Q6EBC2 164 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 SDE2Q6IQ49 451 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 TMEM270Q6UE05 265 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 LCLAT1Q6UWP7 414 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 TOGARAM2Q6ZUX3 1019 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 ABCA7Q8IZY2 2146 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 PPM1KQ8N3J5 372 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 CPXM2Q8N436 756 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 PLD4Q96BZ4 506 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 IPO9Q96P70 1041 aaKnown RBP20.82■□□□□ 0.92
CLN6-206ENST00000565471 CNGB3Q9NQW8 809 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 AGO1Q9UL18 857 aaKnown RBP20.82■□□□□ 0.92
CLN6-206ENST00000565471 SLC27A6Q9Y2P4 619 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 THADAQ6YHU6 1953 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 NUP205Q92621 2012 aa20.82■□□□□ 0.92
CLN6-206ENST00000565471 SLC12A8A0AV02 714 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 BIN1O00499 593 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 HMBSP08397 361 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 GCNT1Q02742 428 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 PAK1Q13153 545 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 STILQ15468 1287 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 SPDYCQ5MJ68 293 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 STPG1Q5TH74 334 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 FYB2Q5VWT5 728 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 LPCAT2Q7L5N7 544 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 CYP2U1Q7Z449 544 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 DENND1CQ8IV53 801 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 TRIM59Q8IWR1 403 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 CHPFQ8IZ52 775 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 SIX6OS1Q8N1H7 587 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 PGBD3Q8N328 593 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 TRIML1Q8N9V2 468 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 UBA3Q8TBC4 463 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 RLN3Q8WXF3 142 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 TFAP2BQ92481 460 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 BHMTQ93088 406 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 P2RY11Q96G91 374 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 GABRG3Q99928 467 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 PLK2Q9NYY3 685 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 PCDHB4Q9Y5E5 795 aa20.81■□□□□ 0.92
CLN6-206ENST00000565471 A0A1W2PQF6 199 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 GFRA2O00451 464 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 TM4SF5O14894 197 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 GABRG2P18507 467 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 DHPSP49366 369 aaPredicted RBP20.8■□□□□ 0.92
CLN6-206ENST00000565471 TRIP4Q15650 581 aaPredicted RBP20.8■□□□□ 0.92
CLN6-206ENST00000565471 CNGA2Q16280 664 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 PPM1JQ5JR12 505 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 BSPRYQ5W0U4 402 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 TCEAL6Q6IPX3 200 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 FAM217AQ8IXS0 508 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 NDRG1Q92597 394 aaKnown RBP20.8■□□□□ 0.92
CLN6-206ENST00000565471 TCEAL3Q969E4 200 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 ACOX2Q99424 681 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 CD248Q9HCU0 757 aa20.8■□□□□ 0.92
CLN6-206ENST00000565471 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.8■□□□□ 0.92
CLN6-206ENST00000565471 HBS1LQ9Y450 684 aaKnown RBP20.8■□□□□ 0.92
CLN6-206ENST00000565471 NCOR2Q9Y618 2525 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 YJEFN3A6XGL0 299 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 E7ENQ6 273 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 ZBTB24O43167 697 aaPredicted RBP20.79■□□□□ 0.92
CLN6-206ENST00000565471 MAP3K13O43283 966 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 CYBBP04839 570 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 WASP42768 502 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 MFAP3P55082 362 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 STX17P56962 302 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 KCNH2Q12809 1159 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 RNF43Q68DV7 783 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 FMNL3Q8IVF7 1028 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 EHBP1Q8NDI1 1231 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 IPO4Q8TEX9 1081 aaKnown RBP20.79■□□□□ 0.92
CLN6-206ENST00000565471 RNF139Q8WU17 664 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 SLC35F5Q8WV83 523 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 KAT5Q92993 513 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 EDEM2Q9BV94 578 aa20.79■□□□□ 0.92
CLN6-206ENST00000565471 ABCC13Q9NSE7 274 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms