RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 APBB3O95704 486 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 KLKB1P03952 638 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 CNR2P34972 360 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 MRPS21P82921 87 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 COG7P83436 770 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 GCNT1Q02742 428 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 CNGA2Q16280 664 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 BSPRYQ5W0U4 402 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 LAIR1Q6GTX8 287 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 KLHDC10Q6PID8 442 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 GBP6Q6ZN66 633 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 KBTBD6Q86V97 674 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 FMNL3Q8IVF7 1028 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 CAMKK1Q8N5S9 505 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 FAM160A2Q8N612 972 aaPredicted RBP14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 CCDC26Q8TAB7 109 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 CLEC4CQ8WTT0 213 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 XPO6Q96QU8 1125 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 PARD6AQ9NPB6 346 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 ACP6Q9NPH0 428 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 ST7Q9NRC1 585 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 MMP17Q9ULZ9 603 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 CEP250Q9BV73 2442 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 CHD6Q8TD26 2715 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 THADAQ6YHU6 1953 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 BAHCC1Q9P281 2608 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 SGK1O00141 431 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 DCLK1O15075 740 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 MSI1O43347 362 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 THAP12O43422 761 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 GABBR2O75899 941 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 PRKCSHP14314 528 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 HNRNPLP14866 589 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 EEF1GP26641 437 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 HOXA6P31267 233 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 GBP1P32455 592 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 ID4P47928 161 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 DAOAP59103 153 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 MYL5Q02045 173 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 CCDC6Q16204 474 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 MAN2A1Q16706 1144 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 ANO6Q4KMQ2 910 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 PKDCCQ504Y2 493 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 CDKAL1Q5VV42 579 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 PM20D1Q6GTS8 502 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 DENND1BQ6P3S1 775 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 TRIM65Q6PJ69 517 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 TMEM92Q6UXU6 159 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 Q6ZNB5 142 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 TOGARAM2Q6ZUX3 1019 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 BHLHA9Q7RTU4 235 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 ETFBKMTQ8IXQ9 262 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 PGBD3Q8N328 593 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 PHTF2Q8N3S3 785 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 ZNF513Q8N8E2 541 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 TERB1Q8NA31 727 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 IL17RCQ8NAC3 791 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 GAB3Q8WWW8 586 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 KCTD13Q8WZ19 329 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 BCCIPQ9P287 314 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 WDR35Q9P2L0 1181 aa14.26□□□□□ -0.13
VPS9D1-204ENST00000565023 SYCE3A1L190 88 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 GTPBP10A4D1E9 387 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 KCNJ18B7U540 433 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 TSPAN3O60637 253 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 GNA15P30679 374 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 TNFRSF4P43489 277 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 ZNF132P52740 706 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 MFAP3P55082 362 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 KCNJ12Q14500 433 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 NCAPHQ15003 741 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 STILQ15468 1287 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 NFKBIBQ15653 356 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 CRY1Q16526 586 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 EXOC3L4Q17RC7 722 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 TCP11X2Q5H9J9 407 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 EOGTQ5NDL2 527 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 EGFLAMQ63HQ2 1017 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 NUDT18Q6ZVK8 323 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 ABCA7Q8IZY2 2146 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 SLC35F5Q8WV83 523 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 HMGB4Q8WW32 186 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 BPIFA3Q9BQP9 254 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 TUBGCP2Q9BSJ2 902 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 DCLK3Q9C098 648 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 NAT10Q9H0A0 1025 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 CNGB3Q9NQW8 809 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 ABCC13Q9NSE7 274 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 OLA1Q9NTK5 396 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 FANCLQ9NW38 375 aa14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 AGO1Q9UL18 857 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-204ENST00000565023 FAM170AA1A519 330 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 CACNG3O60359 315 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 RETP07949 1114 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 KIR2DL1P43626 348 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 DGKGP49619 791 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 PREPLQ4J6C6 727 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 VWA3BQ502W6 1294 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 MIIPQ5JXC2 388 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 CACNA2D4Q7Z3S7 1137 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms