RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ZNF212Q9UDV6 495 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 VPS51Q9UID3 782 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 CCDC88BA6NC98 1476 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.08□□□□□ -1.6
CHD9-212ENST00000564641 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.08□□□□□ -1.6
CHD9-212ENST00000564641 H3BNX3 289 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 SCGB1D2O95969 90 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 CRYABP02511 175 aaKnown RBP5.08□□□□□ -1.6
CHD9-212ENST00000564641 PSG1P11464 419 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 CPA2P48052 419 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 DGKQP52824 942 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 DNASE1L3Q13609 305 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 KIAA0753Q2KHM9 967 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 MANEALQ5VSG8 457 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 RUSC1-AS1Q66K80 236 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 SESTD1Q86VW0 696 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 FSTL5Q8N475 847 aaPredicted RBP5.08□□□□□ -1.6
CHD9-212ENST00000564641 P2RY11Q96G91 374 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 SNX22Q96L94 193 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 ARL8BQ9NVJ2 186 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 WWOXQ9NZC7 414 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 ASAP1Q9ULH1 1129 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 HPSEQ9Y251 543 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 SQORQ9Y6N5 450 aa5.08□□□□□ -1.6
CHD9-212ENST00000564641 EIF4G3O43432 1585 aaKnown RBP5.08□□□□□ -1.6
CHD9-212ENST00000564641 ARHGEF11O15085 1522 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 B4DGG1 531 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 FOXN3O00409 490 aaPredicted RBP5.07□□□□□ -1.6
CHD9-212ENST00000564641 TOMM40O96008 361 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 MT-ND5P03915 603 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 S100BP04271 92 aaPredicted RBP5.07□□□□□ -1.6
CHD9-212ENST00000564641 TMIGD3P0DMS9 266 aaPredicted RBP5.07□□□□□ -1.6
CHD9-212ENST00000564641 CYP19A1P11511 503 aaPredicted RBP5.07□□□□□ -1.6
CHD9-212ENST00000564641 SLC12A2P55011 1212 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 YPEL5P62699 121 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 B4GALNT1Q00973 533 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 COLCA1Q6ZS62 124 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 MMP21Q8N119 569 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 FAM156AQ8NDB6 213 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 SELENOOQ9BVL4 669 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 RNF26Q9BY78 433 aaPredicted RBP5.07□□□□□ -1.6
CHD9-212ENST00000564641 BTBD1Q9H0C5 482 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 FAM234AQ9H0X4 552 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 TCEAL9Q9UHQ7 104 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.07□□□□□ -1.6
CHD9-212ENST00000564641 RIMBP3CA6NJZ7 1639 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 RIMBP3BA6NNM3 1639 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 RIMBP3Q9UFD9 1639 aa5.07□□□□□ -1.6
CHD9-212ENST00000564641 TPP1O14773 563 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 PPM1GO15355 546 aaPredicted RBP5.06□□□□□ -1.6
CHD9-212ENST00000564641 PLAUP00749 431 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 PEX2P28328 305 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 NTSR1P30989 418 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 THBS3P49746 956 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 WDR5P61964 334 aaKnown RBP5.06□□□□□ -1.6
CHD9-212ENST00000564641 MTX1Q13505 466 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 KPNB1Q14974 876 aaKnown RBP5.06□□□□□ -1.6
CHD9-212ENST00000564641 EARS2Q5JPH6 523 aaKnown RBP5.06□□□□□ -1.6
CHD9-212ENST00000564641 DAB2IPQ5VWQ8 1189 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 RNF44Q7L0R7 432 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 P3H2Q8IVL5 708 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 WASF1Q92558 559 aa5.06□□□□□ -1.6
CHD9-212ENST00000564641 UNKQ9C0B0 810 aaKnown RBP5.06□□□□□ -1.6
CHD9-212ENST00000564641 SYNJ1O43426 1573 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 A6NNZ2 444 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 TTC34A8MYJ7 566 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 CA12O43570 354 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 PRAMEF2O60811 474 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 WDR47O94967 919 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 ALPLP05186 524 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 GALNSP34059 522 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 IL6STP40189 918 aaPredicted RBP5.05□□□□□ -1.6
CHD9-212ENST00000564641 KCNAB1Q14722 419 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 ACOX1Q15067 660 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 GPR162Q16538 588 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 PLEKHG6Q3KR16 790 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 CYB5RLQ6IPT4 315 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 KIAA1161Q6NSJ0 714 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 ZNF793Q6ZN11 406 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 FAM57BQ71RH2 274 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 ZNF548Q8NEK5 533 aaPredicted RBP5.05□□□□□ -1.6
CHD9-212ENST00000564641 FCRL5Q96RD9 977 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 TUBB6Q9BUF5 446 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 SLC25A32Q9H2D1 315 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 HEYLQ9NQ87 328 aaPredicted RBP5.05□□□□□ -1.6
CHD9-212ENST00000564641 VPS45Q9NRW7 570 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 RXFP3Q9NSD7 469 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 TMEM45AQ9NWC5 275 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 EID1Q9Y6B2 187 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 SIRT4Q9Y6E7 314 aaPredicted RBP5.05□□□□□ -1.6
CHD9-212ENST00000564641 MAGI1Q96QZ7 1491 aaPredicted RBP5.05□□□□□ -1.6
CHD9-212ENST00000564641 SOGA1O94964 1423 aa5.05□□□□□ -1.6
CHD9-212ENST00000564641 CNTNAP2Q9UHC6 1331 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 ZNF608Q9ULD9 1512 aaPredicted RBP5.04□□□□□ -1.6
CHD9-212ENST00000564641 IGLV5-39A0A0G2JS06 123 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 THAP12O43422 761 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 ANXA2P07355 339 aaKnown RBP5.04□□□□□ -1.6
CHD9-212ENST00000564641 DUSP1P28562 367 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 HTR7P34969 479 aa5.04□□□□□ -1.6
CHD9-212ENST00000564641 GBX1Q14549 363 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms