RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 PAX3P23760 479 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 RPA1P27694 616 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 HOXD13P35453 343 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PCK1P35558 622 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 LIMS1P48059 325 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 CASP4P49662 377 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PEX5P50542 639 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PAPOLAP51003 745 aaKnown RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 RAB27AP51159 221 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 SLC18A1P54219 525 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 RAD23BP54727 409 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 INHBEP58166 350 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PRR5P85299 388 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 MYL7Q01449 175 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 KRT17Q04695 432 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 ZNF543Q08ER8 600 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 MGAT5Q09328 741 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PTK6Q13882 451 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 CTTNQ14247 550 aaKnown RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 STAT4Q14765 748 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 SIX1Q15475 284 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 TARBP2Q15633 366 aaKnown RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 SLC15A2Q16348 729 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 CGB2Q6NT52 195 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 IRGCQ6NXR0 463 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 RGS9BPQ6ZS82 235 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 VSIG1Q86XK7 387 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 ECHDC2Q86YB7 292 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 MAPKAPK5Q8IW41 473 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 GDAP1Q8TB36 358 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PARD3BQ8TEW8 1205 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 TEKT4Q8WW24 435 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 ALG3Q92685 438 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 ZBTB10Q96DT7 871 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 BORCS6Q96GS4 357 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 SNF8Q96H20 258 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 RCC1LQ96I51 464 aaKnown RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 RMDN2Q96LZ7 410 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 TRAPPC9Q96Q05 1148 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 FAM167BQ9BTA0 163 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 TUBB6Q9BUF5 446 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 DDX23Q9BUQ8 820 aaKnown RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 RTFDC1Q9BY42 306 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PITPNM3Q9BZ71 974 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 GPR88Q9GZN0 384 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 INTS2Q9H0H0 1204 aaKnown RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 THAP2Q9H0W7 228 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 MYLK2Q9H1R3 596 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PIF1Q9H611 641 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 DCLRE1BQ9H816 532 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 JMJD4Q9H9V9 463 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 CAPN10Q9HC96 672 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 UBN1Q9NPG3 1134 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PCDH12Q9NPG4 1184 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 OLFML3Q9NRN5 406 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 CGGBP1Q9UFW8 167 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 LNPEPQ9UIQ6 1025 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 PLA2G2DQ9UNK4 145 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 COG5Q9UP83 839 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 ZMYM2Q9UBW7 1377 aa4.98□□□□□ -1.61
CAPN3-212ENST00000564503 ZNF638Q14966 1978 aaKnown RBP4.98□□□□□ -1.61
CAPN3-212ENST00000564503 GPR75-ASB3A0A0A6YYF3 556 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 IGKV6D-41A0A0C4DH26 115 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 C2orf71A6NGG8 1288 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 OTOL1A6NHN0 477 aaPredicted RBP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 FAM47DPA6NHR8 397 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 MPHOSPH10O00566 681 aaKnown RBP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 TRAFD1O14545 582 aaPredicted RBP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 ZBTB5O15062 677 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 P4HA2O15460 535 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 PRPF4O43172 522 aaKnown RBP eCLIP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 TGFB1I1O43294 461 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 THAP12O43422 761 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 SPOPO43791 374 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 ECE2O60344 883 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 FOXD2O60548 495 aaPredicted RBP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 SMIM24O75264 130 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 ACSL3O95573 720 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 FTLP02792 175 aaPredicted RBP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 ABHD2P08910 425 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 GSTA2P09210 222 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 GLI4P10075 376 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 GZMAP12544 262 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 ATF2P15336 505 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 COMTP21964 271 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 PTPN4P29074 926 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 CDC25CP30307 473 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 RFC4P35249 363 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 VHLP40337 213 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 BUD31P41223 144 aaPredicted RBP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 BTDP43251 543 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 SSR1P43307 286 aaKnown RBP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 MARCKSL1P49006 195 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 SEPHS1P49903 392 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 TBX4P57082 545 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 RNASELQ05823 741 aaKnown RBP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 CETN1Q12798 172 aa4.97□□□□□ -1.61
CAPN3-212ENST00000564503 PABPC4Q13310 644 aaKnown RBP eCLIP4.97□□□□□ -1.61
CAPN3-212ENST00000564503 MYBPC2Q14324 1141 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms