RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	PTGES3L	E9PB15	166 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PSMD12	O00232	456 aa	Predicted RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SEC24D	O94855	1032 aa	Predicted RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	HADHB	P55084	474 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ATP1A4	Q13733	1029 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TRIM25	Q14258	630 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PAOX	Q6QHF9	649 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	LZTS3	O60299	673 aa	Predicted RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	LDHB	P07195	334 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	HOXC9	P31274	260 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TCP10L	Q8TDR4	215 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	DUSP9	Q99956	384 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PUS3	Q9BZE2	481 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	C1orf112	Q9NSG2	853 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ZBTB1	Q9Y2K1	713 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC12A1	Q13621	1099 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CTC1	Q2NKJ3	1217 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	MAEA	Q7L5Y9	396 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SIK3	Q9Y2K2	1263 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	LMO7	Q8WWI1	1683 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	KPNA3	O00505	521 aa	Predicted RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TMCC2	O75069	709 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	NDUFS2	O75306	463 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CCNE2	O96020	404 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ATP6V0D1	P61421	351 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	HABP4	Q5JVS0	413 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	IQSEC1	Q6DN90	963 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	FGD2	Q7Z6J4	655 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	AURKB	Q96GD4	344 aa	Predicted RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TCF12	Q99081	682 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM118B	Q9BPY3	351 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF556	Q9HAH1	456 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TMEM45A	Q9NWC5	275 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CDYL	Q9Y232	598 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PRPSAP2	O60256	369 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	DNAJA2	O60884	412 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	OASL	Q15646	514 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	NEK5	Q6P3R8	708 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ASB2	Q96Q27	587 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	GRIP2	Q9C0E4	1043 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PUS7L	Q9H0K6	701 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	HSD3B7	Q9H2F3	369 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TOR4A	Q9NXH8	423 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ATRN	O75882	1429 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	MYPN	Q86TC9	1320 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	GYS1	P13807	737 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PAM	P19021	973 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ATG14	Q6ZNE5	492 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TLK2	Q86UE8	772 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	MAPRE3	Q9UPY8	281 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	C10orf71	Q711Q0	1435 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	NID2	Q14112	1375 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288		B8ZZF3	427 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288		F8W810	466 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ITGA10	O75578	1167 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CD4	P01730	458 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	MAPT	P10636	758 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PTPN2	P17706	415 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	DMP1	Q13316	513 aa	Predicted RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SKIV2L	Q15477	1246 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	C1QTNF12	Q5T7M4	302 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SENP7	Q9BQF6	1050 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ANAPC7	Q9UJX3	599 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	EIF3E	P60228	445 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	DCDC5	Q6ZRR9	648 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ERO1B	Q86YB8	467 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TMEM114	B3SHH9	223 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TLL1	O43897	1013 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SHBG	P04278	402 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TNNI1	P19237	187 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CYP2J2	P51589	502 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PHC1	P78364	1004 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SCN1B	Q07699	218 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SMU1	Q2TAY7	513 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ARPIN	Q7Z6K5	226 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ANGPTL6	Q8NI99	470 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	FUOM	A2VDF0	154 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TLR3	O15455	904 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	GABBR2	O75899	941 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SERPINB5	P36952	375 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	BCAR1	P56945	870 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CENPN	Q96H22	339 aa	Predicted RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ACAT2	Q9BWD1	397 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	GDAP2	Q9NXN4	497 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	YES1	P07947	543 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ALOX12	P18054	663 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CAMK1	Q14012	370 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	FBXO43	Q4G163	708 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CCDC81	Q6ZN84	652 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	GPBP1L1	Q9HC44	474 aa	Predicted RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ARL8B	Q9NVJ2	186 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CHKB	Q9Y259	395 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TRIM49D1	C9J1S8	452 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF23	P17027	643 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ESCO2	Q56NI9	601 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SLCO2A1	Q92959	643 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	GRIN2D	O15399	1336 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM237B	A0A1B0GVD1	139 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	EFCAB10	A6NFE3	127 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PAPSS1	O43252	624 aa	Predicted RBP	4.37	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms