RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SH2B3Q9UQQ2 575 aa2.9□□□□□ -1.95
CHD9-209ENST00000564255 MAP3K2Q9Y2U5 619 aa2.9□□□□□ -1.95
CHD9-209ENST00000564255 NOX1Q9Y5S8 564 aa2.9□□□□□ -1.95
CHD9-209ENST00000564255 TMEM200CA6NKL6 621 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 M0QYT0 321 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 MUSKO15146 869 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 PPM1DO15297 605 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 NKX2-8O15522 239 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 SPRY2O43597 315 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 RTN3O95197 1032 aaPredicted RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 TMEM225BP0DP42 221 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 RPS6KB1P23443 525 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 TXKP42681 527 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 RPL15P61313 204 aaKnown RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 SEMA3BQ13214 749 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 RRP1BQ14684 758 aaKnown RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 TSTQ16762 297 aaKnown RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 FAM187BQ17R55 369 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 SLC45A4Q5BKX6 768 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 RABL3Q5HYI8 236 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 LIMS2Q7Z4I7 341 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 ANKRD52Q8NB46 1076 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D22AQ8WUA7 517 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 NPIPB3Q92617 1050 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 ERP27Q96DN0 273 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 REXO5Q96IC2 774 aaKnown RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 FMNL2Q96PY5 1086 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 BARD1Q99728 777 aaKnown RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 HERC2P3Q9BVR0 1158 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 ACTRT3Q9BYD9 372 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 TAOK3Q9H2K8 898 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 CD248Q9HCU0 757 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 POLG2Q9UHN1 485 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 CNPY2Q9Y2B0 182 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 PCDHB7Q9Y5E2 793 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 RUSC2Q8N2Y8 1516 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 TRGV11A0A075B6L2 103 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 PGPEP1LA6NFU8 196 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 HNRNPRO43390 633 aaKnown RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 LPXNO60711 386 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 RECQL4O94761 1208 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 CYP3A4P08684 503 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 ACRV1P26436 265 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 CFPP27918 469 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 MCM5P33992 734 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 NXPH1P58417 271 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 IRX6P78412 446 aaPredicted RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 RESTQ13127 1097 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 DNASE1L3Q13609 305 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 ZNF569Q5MCW4 686 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 ITPRIPL1Q6GPH6 555 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 H1FNTQ75WM6 255 aaPredicted RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 TMPRSS6Q8IU80 811 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 LNX2Q8N448 690 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 FAM71DQ8N9W8 422 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 FEZF2Q8TBJ5 459 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 ARHGAP39Q9C0H5 1083 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 XYLT2Q9H1B5 865 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 HSF4Q9ULV5 492 aa2.89□□□□□ -1.95
CHD9-209ENST00000564255 UBE2J1Q9Y385 318 aaPredicted RBP2.89□□□□□ -1.95
CHD9-209ENST00000564255 A1L4Q6 167 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 WDR27A2RRH5 827 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 DHX16O60231 1041 aaKnown RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 ZNF623O75123 536 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 GFPT2O94808 682 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 TJP3O95049 919 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 SCAF4O95104 1147 aaKnown RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 VNN1O95497 513 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 F9P00740 461 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 ADRA1DP25100 572 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 HIBADHP31937 336 aaKnown RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 GKP32189 559 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 THBS4P35443 961 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 PNPLA4P41247 253 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 CCT4P50991 539 aaKnown RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 CLNS1AP54105 237 aaKnown RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 NAP1L1P55209 391 aaKnown RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 TLE3Q04726 772 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 SPDYE7PQ495Y7 208 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 TEDDM1Q5T9Z0 273 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 CCDC30Q5VVM6 783 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 GRHL2Q6ISB3 625 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 DENND1BQ6P3S1 775 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 ACSM6Q6P461 480 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 VWA1Q6PCB0 445 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 C16orf89Q6UX73 402 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 MAVSQ7Z434 540 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 CAND1Q86VP6 1230 aaKnown RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 LINS1Q8NG48 757 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 RNF125Q96EQ8 232 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 WWC2-AS2Q96NR7 200 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 PIGSQ96S52 555 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 TPSD1Q9BZJ3 242 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 ACAD9Q9H845 621 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 FBXO28Q9NVF7 368 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 ORC3Q9UBD5 711 aaPredicted RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 RCE1Q9Y256 329 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 RABGAP1Q9Y3P9 1069 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 ZNF536O15090 1300 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms