RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 RCOR3Q9P2K3 495 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-202ENST00000563366 AMACRQ9UHK6 382 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 KIAA1671Q9BY89 1806 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 COL4A6Q14031 1691 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 A0A1W2PRU2 124 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 HHLA1C9JL84 531 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 GRAP2O75791 330 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ZNF189O75820 626 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 BEST1O76090 585 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ENDOD1O94919 500 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 UPP2O95045 317 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 IL2RAP01589 272 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 RARAP10276 462 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 CPB1P15086 417 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 KDELR1P24390 212 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 IGFBP6P24592 240 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 WEE1P30291 646 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 RDXP35241 583 aaKnown RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 COILP38432 576 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 GRIK1P39086 918 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 CDKN2BP42772 138 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 SULT1E1P49888 294 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ZNF135P52742 658 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 DRG2P55039 364 aaKnown RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ATP11AP98196 1134 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 GUCY2DQ02846 1103 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ADCY1Q08828 1119 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 PPIGQ13427 754 aaKnown RBP eCLIP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 KRT81Q14533 505 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 TAZQ16635 292 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 TCTN1Q2MV58 587 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 C15orf59Q2T9L4 293 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 DCAF6Q58WW2 860 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ERMARDQ5T6L9 678 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 DAB2IPQ5VWQ8 1189 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 PM20D1Q6GTS8 502 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 DRICH1Q6PGQ1 229 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 MFSD7Q6UXD7 560 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 CCNI2Q6ZMN8 369 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 BBS12Q6ZW61 710 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 SND1Q7KZF4 910 aaKnown RBP eCLIP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ADAT2Q7Z6V5 191 aaKnown RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 CEP57Q86XR8 500 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ARHGAP18Q8N392 663 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 KDF1Q8NAX2 398 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ZMIZ2Q8NF64 920 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 C1orf216Q8TAB5 229 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 SEC14L1Q92503 715 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 NT5C3BQ969T7 300 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 PGAP3Q96FM1 320 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 PKNOX2Q96KN3 472 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 C8orf48Q96LL4 319 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ZNF558Q96NG5 402 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ZNF670Q9BS34 389 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 MAK16Q9BXY0 300 aaKnown RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 EPC1Q9H2F5 836 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 FBXO44Q9H4M3 255 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 IL23AQ9NPF7 189 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 PRDM10Q9NQV6 1147 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 AAASQ9NRG9 546 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 COMMD8Q9NX08 183 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 ABI2Q9NYB9 513 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 PCSK1NQ9UHG2 260 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 DMGDHQ9UI17 866 aaKnown RBP10.1□□□□□ -0.79
UBFD1-202ENST00000563366 USP3Q9Y6I4 520 aa10.1□□□□□ -0.79
UBFD1-202ENST00000563366 F8W810 466 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 PI4K2BG5E9Z4 385 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 MEN1O00255 615 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 TTI1O43156 1089 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 RTN3O95197 1032 aaPredicted RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 CSF2RAP15509 400 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 TCF4P15884 667 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 ZFXP17010 805 aaPredicted RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 GATMP50440 423 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 CDH6P55285 790 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 HDAC4P56524 1084 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 WDR5P61964 334 aaKnown RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 RPL10AP62906 217 aaKnown RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 SLC7A5Q01650 507 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 CREMQ03060 361 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 GPS2Q13227 327 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 CLN3Q13286 438 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 GPR17Q13304 367 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 BTG3Q14201 252 aaPredicted RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 TLR1Q15399 786 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 PPP1R7Q15435 360 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 SIX1Q15475 284 aaPredicted RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 TAF5Q15542 800 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 DPYSL2Q16555 572 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 SMTNL2Q2TAL5 461 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 ARL13BQ3SXY8 428 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 SPOUT1Q5T280 376 aaKnown RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 KIAA1841Q6NSI8 718 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 TRNP1Q6NT89 227 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 AADACL2Q6P093 401 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 SCYL2Q6P3W7 929 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 PSRC1Q6PGN9 363 aaPredicted RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms