RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 PSMD5Q16401 504 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 SLC8B1Q6J4K2 584 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 ZDHHC24Q6UX98 284 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 SYDE1Q6ZW31 735 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-208ENST00000563220 BEND5Q7L4P6 421 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 COLGALT1Q8NBJ5 622 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.76■□□□□ 0.59
COMMD4-208ENST00000563220 C10orf88Q9H8K7 445 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 NMUR1Q9HB89 426 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 ZDHHC18Q9NUE0 388 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 DDIT4Q9NX09 232 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 BACE2Q9Y5Z0 518 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 WDR27A2RRH5 827 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 ZBBXA8MT70 800 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 C2CD2LO14523 706 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 GAS8O95995 478 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 HAPLN1P10915 354 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-208ENST00000563220 IVDP26440 423 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 ADRA1BP35368 520 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 MGAT5BQ3V5L5 792 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 TAC4Q86UU9 113 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 PSTKQ8IV42 348 aaKnown RBP18.75■□□□□ 0.59
COMMD4-208ENST00000563220 PLD5Q8N7P1 536 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 GLIS1Q8NBF1 620 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 DQX1Q8TE96 717 aaKnown RBP18.75■□□□□ 0.59
COMMD4-208ENST00000563220 SLC9A7Q96T83 725 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 YME1L1Q96TA2 773 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 SEPT5Q99719 369 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-208ENST00000563220 CLSTN3Q9BQT9 956 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 OSER1Q9NX31 292 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.75■□□□□ 0.592e-7■■□□□ 14.4
COMMD4-208ENST00000563220 IL37Q9NZH6 218 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 CWC15Q9P013 229 aaKnown RBP18.75■□□□□ 0.59
COMMD4-208ENST00000563220 SCML2Q9UQR0 700 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 A0A1W2PQH9 124 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 ZNF487B1APH4 448 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 FGBP02675 491 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 LAG3P18627 525 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 OR1D2P34982 312 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 PLTPP55058 493 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 ROR1Q01973 937 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 NNTQ13423 1086 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 TERF2Q15554 542 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 BTBD8Q5XKL5 378 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 SLC9A4Q6AI14 798 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 KIAA1841Q6NSI8 718 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 C1orf228Q6PIY5 440 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 ALLCQ8N6M5 410 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-208ENST00000563220 TMEM169Q96HH4 297 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 CSPG4P5Q96PW8 444 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 TMEM121Q9BTD3 319 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 FRMD8P1Q9BZ68 369 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-208ENST00000563220 FAM204AQ9H8W3 233 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 ABCC13Q9NSE7 274 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 FBXW11Q9UKB1 542 aa18.75■□□□□ 0.59
COMMD4-208ENST00000563220 ITGAVP06756 1048 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 ETS1P14921 441 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 KLRC2P26717 231 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 LMNB2Q03252 620 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 PPIGQ13427 754 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■■■□ 25.8
COMMD4-208ENST00000563220 EIF4EBP2Q13542 120 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-208ENST00000563220 GSTA5Q7RTV2 222 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 TSEN2Q8NCE0 465 aaKnown RBP18.74■□□□□ 0.59
COMMD4-208ENST00000563220 FBXO25Q8TCJ0 367 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 C2orf15Q8WU43 125 aaKnown RBP18.74■□□□□ 0.59
COMMD4-208ENST00000563220 ZBTB9Q96C00 473 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 FBXO44Q9H4M3 255 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 SPG21Q9NZD8 308 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 CXXC1Q9P0U4 656 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-208ENST00000563220 PRKAG2Q9UGJ0 569 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 ASIC3Q9UHC3 531 aa18.74■□□□□ 0.59
COMMD4-208ENST00000563220 COL4A4P53420 1690 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-208ENST00000563220 APOL1O14791 398 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 TP73O15350 636 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 F9P00740 461 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 IGLV3-25P01717 112 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 KRT14P02533 472 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 ZSCAN5DPP0CG00 497 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 GOT1P17174 413 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 CXCR3P49682 368 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 DSG1Q02413 1049 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 MTMR3Q13615 1198 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 NOMO1Q15155 1222 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 DENND5BQ6ZUT9 1274 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 MON1AQ86VX9 555 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 NTAN1Q96AB6 310 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 TRIM62Q9BVG3 475 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 NUDT5Q9UKK9 219 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 FAM92AA1XBS5 289 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 GJB5O95377 273 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 AMPD1P23109 780 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 VPS41P49754 854 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 EIF3EP60228 445 aaKnown RBP18.73■□□□□ 0.59
COMMD4-208ENST00000563220 FPGSQ05932 587 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 TMEM240Q5SV17 173 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 B4GALNT4Q76KP1 1039 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 P3H4Q92791 437 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 ART4Q93070 314 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 SPATA17Q96L03 361 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms