RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 BPIFB4P59827 614 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 AMPD2Q01433 879 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 GOLGA8FQ08AF8 430 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 GOLGA8DPQ0D2H9 430 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 NR1H3Q13133 447 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 DRAP1Q14919 205 aaPredicted RBP17.36■□□□□ 0.37
CDT1-202ENST00000562747 ST3GAL2Q16842 350 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 C10orf120Q5SQS8 335 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 FSTL4Q6MZW2 842 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 BHLHA9Q7RTU4 235 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 STK32AQ8WU08 396 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 OTUB2Q96DC9 234 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 KLF16Q9BXK1 252 aaPredicted RBP17.36■□□□□ 0.37
CDT1-202ENST00000562747 STK33Q9BYT3 514 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 GANQ9H2C0 597 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 ACP6Q9NPH0 428 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 PCDHGC3Q9UN70 934 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 SH3BP1Q9Y3L3 701 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 AXIN1O15169 862 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 FBXO21O94952 628 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 CAVIN2O95810 425 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 ATP1A3P13637 1013 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 LCP1P13796 627 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 KCNA4P22459 653 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 CLCN1P35523 988 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 ACADSBP45954 432 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 DAOAP59103 153 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 UBXN1Q04323 297 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 NAIF1Q69YI7 327 aaPredicted RBP17.35■□□□□ 0.37
CDT1-202ENST00000562747 DENND1BQ6P3S1 775 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 KBTBD6Q86V97 674 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 SYNPOQ8N3V7 929 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 IRGQQ8WZA9 623 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 ERGIC2Q96RQ1 377 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 ARRDC1-AS1Q9H2J1 176 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 LINC00597Q9H2U6 94 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 SMOC1Q9H4F8 434 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 SIK3Q9Y2K2 1263 aa17.35■□□□□ 0.37
CDT1-202ENST00000562747 GABBR2O75899 941 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 IQCB1Q15051 598 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 SYCP1Q15431 976 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 ZSCAN23Q3MJ62 389 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 AASDHQ4L235 1098 aaPredicted RBP17.34■□□□□ 0.37
CDT1-202ENST00000562747 TMEM196Q5HYL7 178 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 BTBD8Q5XKL5 378 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 HTR3DQ70Z44 454 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 SLC47A2Q86VL8 602 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 ADGRG2Q8IZP9 1017 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 GAB3Q8WWW8 586 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 NDRG1Q92597 394 aaKnown RBP17.34■□□□□ 0.37
CDT1-202ENST00000562747 EXOC4Q96A65 974 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 ATG2BQ96BY7 2078 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 LHX5Q9H2C1 402 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 ABCC13Q9NSE7 274 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 OLA1Q9NTK5 396 aaKnown RBP17.34■□□□□ 0.37
CDT1-202ENST00000562747 NUDT5Q9UKK9 219 aa17.34■□□□□ 0.37
CDT1-202ENST00000562747 YJEFN3A6XGL0 299 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 E7ENQ6 273 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 F8VZ95 297 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 MDM4O15151 490 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 SART1O43290 800 aaKnown RBP17.33■□□□□ 0.36
CDT1-202ENST00000562747 RPP40O75818 363 aaKnown RBP17.33■□□□□ 0.36
CDT1-202ENST00000562747 EPN2O95208 641 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 PNMA6AP0CW24 399 aaPredicted RBP17.33■□□□□ 0.36
CDT1-202ENST00000562747 GJA4P35212 333 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 KRT9P35527 623 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 KLK7P49862 253 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 COG7P83436 770 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 BSPRYQ5W0U4 402 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 RSRC2Q7L4I2 434 aaKnown RBP17.33■□□□□ 0.36
CDT1-202ENST00000562747 SLC4A5Q9BY07 1137 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 FBRSL1Q9HCM7 1045 aaKnown RBP17.33■□□□□ 0.36
CDT1-202ENST00000562747 ST7Q9NRC1 585 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 FAM207AQ9NSI2 230 aaPredicted RBP17.33■□□□□ 0.36
CDT1-202ENST00000562747 RASAL2Q9UJF2 1139 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 LSM7Q9UK45 103 aaKnown RBP17.33■□□□□ 0.36
CDT1-202ENST00000562747 STRIP2Q9ULQ0 834 aa17.33■□□□□ 0.36
CDT1-202ENST00000562747 SDK1Q7Z5N4 2213 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 PIK3R2O00459 728 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 TRDMT1O14717 391 aaKnown RBP17.32■□□□□ 0.36
CDT1-202ENST00000562747 TM4SF5O14894 197 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 GREM1O60565 184 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 EGFP01133 1207 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 IRF1P10914 325 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 CYP11B1P15538 503 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 POLR2FP61218 127 aaKnown RBP17.32■□□□□ 0.36
CDT1-202ENST00000562747 EFEMP1Q12805 493 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 TMEM110Q86TL2 294 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 NEK11Q8NG66 645 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 RNF139Q8WU17 664 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 GOLGA1Q92805 767 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 PCMTD1Q96MG8 357 aaPredicted RBP17.32■□□□□ 0.36
CDT1-202ENST00000562747 CBX8Q9HC52 389 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 MARCH2Q9P0N8 246 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 CYTH4Q9UIA0 394 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 CEP83Q9Y592 693 aa17.32■□□□□ 0.36
CDT1-202ENST00000562747 CNOT1A5YKK6 2376 aaKnown RBP17.31■□□□□ 0.36
CDT1-202ENST00000562747 SCAMP3O14828 347 aaKnown RBP17.31■□□□□ 0.36
CDT1-202ENST00000562747 EPHB6O15197 1021 aa17.31■□□□□ 0.36
CDT1-202ENST00000562747 RNF40O75150 1001 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms