RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 PDCLQ13371 301 aa20.22■□□□□ 0.83
TMEM249-202ENST00000562477 MEA1Q16626 185 aa20.22■□□□□ 0.83
TMEM249-202ENST00000562477 FBXO43Q4G163 708 aa20.22■□□□□ 0.83
TMEM249-202ENST00000562477 DENND1CQ8IV53 801 aa20.22■□□□□ 0.83
TMEM249-202ENST00000562477 ZBTB44Q8NCP5 570 aa20.22■□□□□ 0.83
TMEM249-202ENST00000562477 BBS2Q9BXC9 721 aa20.22■□□□□ 0.83
TMEM249-202ENST00000562477 PLCB1Q9NQ66 1216 aa20.22■□□□□ 0.83
TMEM249-202ENST00000562477 ABCC13Q9NSE7 274 aa20.22■□□□□ 0.83
TMEM249-202ENST00000562477 OLA1Q9NTK5 396 aaKnown RBP20.22■□□□□ 0.83
TMEM249-202ENST00000562477 PLK2Q9NYY3 685 aa20.22■□□□□ 0.83
TMEM249-202ENST00000562477 LIMA1Q9UHB6 759 aaKnown RBP20.22■□□□□ 0.83
TMEM249-202ENST00000562477 AGO1Q9UL18 857 aaKnown RBP20.22■□□□□ 0.83
TMEM249-202ENST00000562477 TULP3O75386 442 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 KAT7O95251 611 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 PAPSS2O95340 614 aaPredicted RBP20.21■□□□□ 0.83
TMEM249-202ENST00000562477 FYNP06241 537 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 ATP1A3P13637 1013 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 EIF2DP41214 584 aaKnown RBP20.21■□□□□ 0.83
TMEM249-202ENST00000562477 ACADSBP45954 432 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 PXNP49023 591 aaPredicted RBP20.21■□□□□ 0.83
TMEM249-202ENST00000562477 PTK2Q05397 1052 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 TRIP4Q15650 581 aaPredicted RBP20.21■□□□□ 0.83
TMEM249-202ENST00000562477 C2orf27AQ580R0 203 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 EMC10Q5UCC4 262 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 MSANTD2Q6P1R3 559 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 ZC3H14Q6PJT7 736 aaKnown RBP20.21■□□□□ 0.83
TMEM249-202ENST00000562477 APTXQ7Z2E3 356 aaKnown RBP20.21■□□□□ 0.83
TMEM249-202ENST00000562477 C1orf131Q8NDD1 294 aaKnown RBP20.21■□□□□ 0.83
TMEM249-202ENST00000562477 USP33Q8TEY7 942 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 STK32AQ8WU08 396 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 ATRIPQ8WXE1 791 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 FAM149B1Q96BN6 582 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 PIWIL1Q96J94 861 aaKnown RBP20.21■□□□□ 0.83
TMEM249-202ENST00000562477 CPXM1Q96SM3 734 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 ZDHHC4Q9NPG8 344 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 PCDHGC3Q9UN70 934 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 SIK3Q9Y2K2 1263 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 PCDHGA2Q9Y5H1 932 aa20.21■□□□□ 0.83
TMEM249-202ENST00000562477 MYO18AQ92614 2054 aaKnown RBP20.2■□□□□ 0.82
TMEM249-202ENST00000562477 LGALS16A8MUM7 142 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 LILRB5O75023 590 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 APODP05090 189 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 TYRP14679 529 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 PPP2R5DQ14738 602 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 TMEM110Q86TL2 294 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 CCDC33Q8N5R6 958 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 PLD4Q96BZ4 506 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 HHIPQ96QV1 700 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 DCLK3Q9C098 648 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 FAM207AQ9NSI2 230 aaPredicted RBP20.2■□□□□ 0.82
TMEM249-202ENST00000562477 DNAJC17Q9NVM6 304 aaKnown RBP20.2■□□□□ 0.82
TMEM249-202ENST00000562477 MARK1Q9P0L2 795 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 NAALADL1Q9UQQ1 740 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 HBS1LQ9Y450 684 aaKnown RBP20.2■□□□□ 0.82
TMEM249-202ENST00000562477 SDK1Q7Z5N4 2213 aa20.2■□□□□ 0.82
TMEM249-202ENST00000562477 F8VZ95 297 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 TPM2P07951 284 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 GRIA2P42262 883 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 SRSF5Q13243 272 aaKnown RBP20.19■□□□□ 0.82
TMEM249-202ENST00000562477 SYCP1Q15431 976 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 TAF5Q15542 800 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 FKBP15Q5T1M5 1219 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 TAF3Q5VWG9 929 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 DHX40Q8IX18 779 aaKnown RBP20.19■□□□□ 0.82
TMEM249-202ENST00000562477 DQX1Q8TE96 717 aaKnown RBP20.19■□□□□ 0.82
TMEM249-202ENST00000562477 FUCA2Q9BTY2 467 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 FAM126AQ9BYI3 521 aaPredicted RBP20.19■□□□□ 0.82
TMEM249-202ENST00000562477 STK33Q9BYT3 514 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 WDR35Q9P2L0 1181 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 DEC1Q9P2X7 70 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 SLC8A2Q9UPR5 921 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 ZNF510Q9Y2H8 683 aa20.19■□□□□ 0.82
TMEM249-202ENST00000562477 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.18■□□□□ 0.82
TMEM249-202ENST00000562477 CACNG3O60359 315 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 ATG13O75143 517 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 LMNAP02545 664 aaKnown RBP20.18■□□□□ 0.82
TMEM249-202ENST00000562477 NCAM1P13591 858 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 CYP11B1P15538 503 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 CDK11BP21127 795 aaKnown RBP20.18■□□□□ 0.82
TMEM249-202ENST00000562477 KRT9P35527 623 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 TIE1P35590 1138 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 POLR2FP61218 127 aaKnown RBP20.18■□□□□ 0.82
TMEM249-202ENST00000562477 DMC1Q14565 340 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 KLHL40Q2TBA0 621 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 SYPL2Q5VXT5 272 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 GRAMD4Q6IC98 578 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 TOGARAM2Q6ZUX3 1019 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 SUMF1Q8NBK3 374 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 ADAM32Q8TC27 787 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 GOLGA1Q92805 767 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 PPP1R13BQ96KQ4 1090 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 LHX5Q9H2C1 402 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 NLRC4Q9NPP4 1024 aa20.18■□□□□ 0.82
TMEM249-202ENST00000562477 CFAP54Q96N23 3096 aa20.17■□□□□ 0.82
TMEM249-202ENST00000562477 A0A0A0MRY4 1105 aa20.17■□□□□ 0.82
TMEM249-202ENST00000562477 TBC1D3BA6NDS4 549 aa20.17■□□□□ 0.82
TMEM249-202ENST00000562477 TSPAN3O60637 253 aa20.17■□□□□ 0.82
TMEM249-202ENST00000562477 PENKP01210 267 aaPredicted RBP20.17■□□□□ 0.82
TMEM249-202ENST00000562477 ERBB2P04626 1255 aa20.17■□□□□ 0.82
TMEM249-202ENST00000562477 KIR2DL1P43626 348 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms