RNA–Protein interactions for RNA: ENST00000561243.5

ACAN-208, Transcript of aggrecan, human

APPRIS P2 TSL 5 BASIC

Gene ACAN, Length 7,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACAN-208	ENST00000561243	FIG4	Q92562	907 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	SH3GL1	Q99961	368 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	MTIF3	Q9H2K0	278 aa	Known RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	RAD54B	Q9Y620	910 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	KATNA1	O75449	491 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	PKN1	Q16512	942 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	KY	Q8NBH2	561 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	MED8	Q96G25	268 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	ADGRE3	Q9BY15	652 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	SPACA6	W5XKT8	324 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	WDR27	A2RRH5	827 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	USP39	Q53GS9	565 aa	Known RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	C19orf18	Q8NEA5	215 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	TATDN2	Q93075	761 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	MRPS26	Q9BYN8	205 aa	Known RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	UBXN6	Q9BZV1	441 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	EPS8L2	Q9H6S3	715 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	AGO4	Q9HCK5	861 aa	Known RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	CAMSAP1	Q5T5Y3	1602 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	CNOT3	O75175	753 aa	Known RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	ABCB1	P08183	1280 aa	Predicted RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	TPBGL	P0DKB5	382 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	PPP4C	P60510	307 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	MCL1	Q07820	350 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	TCF7L2	Q9NQB0	619 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	UTP6	Q9NYH9	597 aa	Known RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	VPS28	Q9UK41	221 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	KLHL20	Q9Y2M5	609 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	TRIM24	O15164	1050 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	SLC2A4	P14672	509 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	ITGB6	P18564	788 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	PKN2	Q16513	984 aa	Known RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	PHKG1	Q16816	387 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	RNF180	Q86T96	592 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	TRPC4AP	Q8TEL6	797 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	RSPH1	Q8WYR4	309 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	FAM120B	Q96EK7	910 aa	Known RBP	11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	PXMP2	Q9NR77	195 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	CYP39A1	Q9NYL5	469 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	RPS6KB2	Q9UBS0	482 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	SESN1	Q9Y6P5	492 aa		11.53	□□□□□ -0.56
ACAN-208	ENST00000561243	FCGR1A	P12314	374 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	FEN1	P39748	380 aa	Known RBP	11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	CAP2	P40123	477 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	PDIA6	Q15084	440 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	TRMT5	Q32P41	509 aa	Known RBP	11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	MOXD1	Q6UVY6	613 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	LPCAT2	Q7L5N7	544 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	ACTL9	Q8TC94	416 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	CAMKK2	Q96RR4	588 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	DCLK3	Q9C098	648 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	SLC12A8	A0AV02	714 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	CBX4	O00257	560 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	PEX1	O43933	1283 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	RHOC	P08134	193 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	TPH1	P17752	444 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	PSMA3	P25788	255 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	STYK1	Q6J9G0	422 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	VMP1	Q96GC9	406 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	ELOVL6	Q9H5J4	265 aa		11.52	□□□□□ -0.56
ACAN-208	ENST00000561243	FAM20B	O75063	409 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	ITGAL	P20701	1170 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	TKTL1	P51854	596 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	MGAT5	Q09328	741 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	ITGA9	Q13797	1035 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	CDKAL1	Q5VV42	579 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	TCP10L	Q8TDR4	215 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	GDPD5	Q8WTR4	605 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	ASZ1	Q8WWH4	475 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	SLC5A5	Q92911	643 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	PCDH9	Q9HC56	1237 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	ZC3H13	Q5T200	1668 aa	Known RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	CCNT2	O60583	730 aa	Known RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	CXCL8	P10145	99 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	PSMB9	P28065	219 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	ELK3	P41970	407 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	RPL21	P46778	160 aa	Known RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	PTPN11	Q06124	597 aa	Predicted RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	NFIL3	Q16649	462 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	ZNF284	Q2VY69	593 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	TYW3	Q6IPR3	259 aa	Known RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	ANKRD13A	Q8IZ07	590 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	FAM9C	Q8IZT9	166 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	TMC2	Q8TDI7	906 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	UTP15	Q8TED0	518 aa	Known RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	CENPT	Q96BT3	561 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	CELF6	Q96J87	481 aa	Known RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	FAM205A	Q6ZU69	1335 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	CASTOR2	A6NHX0	329 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	ZNF862	O60290	1169 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	CSDE1	O75534	798 aa	Known RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	TH	P07101	528 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	FAM58BP	P0C7Q3	252 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	FAS	P25445	335 aa		11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	BST2	Q10589	180 aa	Known RBP	11.52	□□□□□ -0.57
ACAN-208	ENST00000561243	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms